| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1175 |
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| Symbol | |
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| ID | 4278443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1384065 |
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| End bp | 1385429 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133950 |
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| Product | flagellar hook-associated 2 domain-containing protein |
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| Protein accession | YP_749866 |
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| Protein GI | 114562353 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000468888 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTAA CATCGGTAGG GCTAGGTTCG GGCCTAGACA TTAACGGTAT TGTATCTGCT
TTAGTTAGCT CTGAACAAGC CCCAAAAGTT GCTCAGTTTA ACGCCAAAGA GGGCGCGATA
AATGCTGAAA TATCAGCGTT GGGCTCTTTA AAAAGTTCGT TATCTGAATT TAAAAGTAGT
TTAAGTTTTC TGTCTAAAAC AACATCATTC GATAGTCAGA GCGTGTCGCT TTCTAAGAGT
ACTTACCTAA GTGCAACTGT GAGTAACAAT GCGGTGTCTG GCAGTTATAA TGTTGCCGTT
GAGCAACTAG CTGTTAGTCA AAAAGTTGGC TCTGCGGCCG TGAGCGATGT GACGGCAGCG
TTAGATGAAG GCTCGTTAAA TTTTGCCGTT GATGGCAATA GCTTTGATGT CGCAGTCACC
ACAGAAGATA CTTTACAAAC ATTAGTGTCT AAAATTAACT CAGCTAAAGA TAATGTTGGC
GTTACCGCTA CCATAGTTAA CAGTGATGGT GGTGCAAAAT TAGTATTAAC CTCCAACAAA
ACCGGTACCG CCAATAATAT AACGGTTTCG GCAACTGATA CTGGTGCCGG TACTGTGTTG
GCCGATACCT TTGCTATGAC TGAATTGCAA CCTGCCAAAG ATTCGATTAT ATACATTGAC
GGCTTAAAGC TTACTTCGAG CAGTAATACC GTAGAGGGCG CCATTGATGG TGTGACCCTT
AACCTTAAAG ACGCCGATAT CGATAAGCCA ACCACATTAA CTGTTGCACA AAATACCAGT
TCAATAAAAA GTGGCATAAA ATCATTTGTT GAAGCGTTTA ACTCGATGTC GAAAACAATT
ACTGATTTAA CCAGTTACAA TGCTGCGACC GAAACTGCGG CTGTTTTGCA AGGGGATTCG
TTACCTCGCG GGATCCAAAG TCAGTTGCGC GGTGTTATTT CATCTGCATT CTCAACATCA
AGTGGTAATT TATCACTTGC CTCTATCGGC ATTACCACCA CACGTAGTGG CACCTTAGAA
ATAGATGACG ATATTTTAAC CGCAGCATTA AAAAACAATG TTACTGGTAT TAAAGAAATG
TTTACCGCTG AAGATACTGG TGTGGCTGCA AAATTAGACG GCTATCTTGA TTCGTATGTT
GGCACCGGTT CTATTATTGA TAGCCGCGAT AGCTCCTTAG ACGGTAATTT AGAGCGCTTG
AGTGATCAGC GAGAAGTGTT TGCTCGAAAA ATGGCGGCAT TTGAAGCGCG CTTGTTTAAA
CAATATAACT ATATGGATTT GATTGTGGGT CAATTAAGTA CCCAGAGTTC CGATTTACAA
TCACGACTCG ATTCACTTCC AGGGCTTGTG AGTCAAAATA ATTAA
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| Protein sequence | MGLTSVGLGS GLDINGIVSA LVSSEQAPKV AQFNAKEGAI NAEISALGSL KSSLSEFKSS
LSFLSKTTSF DSQSVSLSKS TYLSATVSNN AVSGSYNVAV EQLAVSQKVG SAAVSDVTAA
LDEGSLNFAV DGNSFDVAVT TEDTLQTLVS KINSAKDNVG VTATIVNSDG GAKLVLTSNK
TGTANNITVS ATDTGAGTVL ADTFAMTELQ PAKDSIIYID GLKLTSSSNT VEGAIDGVTL
NLKDADIDKP TTLTVAQNTS SIKSGIKSFV EAFNSMSKTI TDLTSYNAAT ETAAVLQGDS
LPRGIQSQLR GVISSAFSTS SGNLSLASIG ITTTRSGTLE IDDDILTAAL KNNVTGIKEM
FTAEDTGVAA KLDGYLDSYV GTGSIIDSRD SSLDGNLERL SDQREVFARK MAAFEARLFK
QYNYMDLIVG QLSTQSSDLQ SRLDSLPGLV SQNN
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