| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1172 |
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| Symbol | |
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| ID | 4278440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1380178 |
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| End bp | 1381626 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133947 |
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| Product | flagellin domain-containing protein |
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| Protein accession | YP_749863 |
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| Protein GI | 114562350 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1344] Flagellin and related hook-associated proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.503015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTT CAGTTAATAC CAACGTCACA TCAATGAAAG CGCAGGGCAA CTTAAATAAA
GCGCAAAGCG CTACATCCAT GTCTATGGAG CGATTAGCTT CAGGTTTACG TATCAACAGT
GCCAAAGATG ATGCCGCAGG CCTACAAATC TCCAACCGTA TGACGAGTCA GATAAACGGG
ATTGGCGTTG CTATCCGTAA CGCTAACGAT GGCATTTCGA TTGCACAGAC TGCTGAAGGA
GCGTTGAGTG AATCGACAAA TATTTTGCAG CGTATGCGTG ATTTATCGTT ACAATCTGCC
AACGGTTCAA ACTCTGCAAG CGACCGCGCT TCGATGCAGA CAGAGCTTTC TGCACTTCAA
GAGGAATTAA CGCGTATTTC TGATACGACC GCTTTTGGTG GGCAGAAACT GTTAGATGGT
ACTTATGGTA GTCAAGCATT TCAAGTGGGC TCTGACGCAA ATCAAACAAT TAGTATTAGT
TTACGTAGTA GTGCTGCCGA AAATATCGGT GGTCAGAAAA TTACAGGTGC AGGCACAGCA
GCTGGTACGA CGGCGTTAAC CACTGGTGCA CCAGCGTTTG GCGCGGGTAC GTTAACCATT
ACCAATGATG CTACTGGCCA GGCTGGTTTA GTTTCGGCTG CTGTTACTGA CACTGCAAAC
ACTTACGCTA GTAAAATTAA TGCACTAGAA GGAACAACAG GTGTTAGCGC GCGGGCCCAT
ACTGAAATCG AGATTACTTC AGACTATGCA GCAGCCCTAA CAGGTGGCAC TATAGGCAGT
TCCCGTACTG GCGCACCTAC AACAGATATT TCTAGTGTAA CGTCAGCGCA GGGCTTAGTG
GATACAATTA ATGCTGATAG TTCGAACACA GGATTAACGG CAAAGTTAGA TGCTGAAAGT
GGCAACGTTC GTATCGCTTC GTTGGACGGA GACAATATAA CAACGACACA GGTTGGAGGC
GCGACTTTCA CCATTGATTC TGTTGTAAAT GGTGTAGCTG ATGGAGCCGC TATAGATGCT
GCAGTAGCAG CAGGTACAAC TTCATTGGGT GCGATAGAGC TAACGTCAAC AAGTTCTTTT
TCTATGGTAG AGAGTGCTGT TACGGGGGCG TTCAATGGTC TGACTTCTAG TGACGATCTT
GTAAGTTCAA TTGATATCAC CACAGCATCG GGTGCTCAAA GTGCAATATC GGCGATTGAT
GGAGCGATTG CGACGATTGA CTCACAGCGC GCAGATTTAG GTGCGGTGCA AAATCGTATG
GAATTTACTA TTAGCAATTT GAGCAATATT CAAAATAACG TTACCGATGC GCGTAGCCGT
ATTCAGGATG TTGACTTTGC GTCAGAAAGT GCTGAACTTA GTAAACAGCA GATTTTGTCG
CAAGCCTCGT CGTCTATGCT TGCGCAAGCG AATCAGTTAC CACAGGTAGC ATTATCTTTA
CTTGGTTAA
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| Protein sequence | MAISVNTNVT SMKAQGNLNK AQSATSMSME RLASGLRINS AKDDAAGLQI SNRMTSQING
IGVAIRNAND GISIAQTAEG ALSESTNILQ RMRDLSLQSA NGSNSASDRA SMQTELSALQ
EELTRISDTT AFGGQKLLDG TYGSQAFQVG SDANQTISIS LRSSAAENIG GQKITGAGTA
AGTTALTTGA PAFGAGTLTI TNDATGQAGL VSAAVTDTAN TYASKINALE GTTGVSARAH
TEIEITSDYA AALTGGTIGS SRTGAPTTDI SSVTSAQGLV DTINADSSNT GLTAKLDAES
GNVRIASLDG DNITTTQVGG ATFTIDSVVN GVADGAAIDA AVAAGTTSLG AIELTSTSSF
SMVESAVTGA FNGLTSSDDL VSSIDITTAS GAQSAISAID GAIATIDSQR ADLGAVQNRM
EFTISNLSNI QNNVTDARSR IQDVDFASES AELSKQQILS QASSSMLAQA NQLPQVALSL
LG
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