| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1169 |
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| Symbol | flgJ |
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| ID | 4278437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1375808 |
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| End bp | 1376941 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133944 |
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| Product | flagellar rod assembly protein/muramidase FlgJ |
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| Protein accession | YP_749860 |
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| Protein GI | 114562347 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1705] Muramidase (flagellum-specific) |
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| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0546909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATGG AAAAGTTGTC AGCTTCATCG AACTTTCTGG ATCTAGGAGG ACTAGATTCA
CTTCGTGTCC AAGCCCAGAA AGACGAGAAG GGGGCACTTA AAGAAGCGGC AAAGCAATTT
GAAGGTATCT TTATTCAAAT GCTAATGAAA AGCATGCGAG ATGCTAATGC CGCGTTTAAG
TCAGACAATC CAATGAACAG TGAAACCACC GCATTTTTTG AACAAATGCG CGATCAGCAA
ATGTCAGTCG ATTTATCTAA TAAAGGCATG TTGGGGCTGG CTGAGATGAT GGTGCAGCAA
TTAGACCCAG ATGATAGCCC CATTACACCA GCATCGGTAT TGCGTGGTAA TACAGACTAC
AAAGTTAACC CAAGTATGTT TGTTGCTCCA GCAACAGAGT TAGATAAAGA CACTCTCGAT
ATTATCGCGC CAAAAGATCA AATAGCAGCA TCGCATTCTG TTATAGATAG CGCCGAATCG
ATGCGACCAA TGTCAGCCCA ACTTACTAAT GTGCTAGACG GTGAACAGTT AAATAGTGTA
TTGCGCGGTG AGCAATTAGC CAGTCAAGCG GTACAAATAG GCAAAGTATT GCCGCAAGCT
GATGTTACTT TGCCAAAAAG CAAAGGCATA GCTGTGAGTC AATTTACCAG CCCAGAACAT
TTTATTTCAG TGTTGTATCC CCATGCTGAA AAAGCGGCTA AATCGTTAGG AACCTCAGCT
GAGGTATTAA TTGCCCAGTC AGCGTTAGAA ACCGGTTGGG GCCAAAAAGT GGTACGCCGT
AATGACGGCA CTATGAGCCA TAACCTGTTT AATATTAAAG CAGACAAGCG TTGGCAAGGT
GATAAAACCT CAGTCAATAC GTTGGAATTT GAAAAGGGCA TTGCGGTGCA ACAAAAAGCG
GATTTCAGAA TGTATGACAA CCTTGAGCAA AGCTTTAATG ACTTTGTGTC ATTTATTAGC
CAAGGCGATC GTTATCAGGA TGCGCGTAAA GTTGCCAGCG AGCCAACTCA ATTTATTAAA
GCGTTACAAA AAGCTGGCTA CGCCACAGAC CCTCAATATG CCAATAAAGT CATCAATGTG
ATGAAATCGG TTAAAGAAGG CCTTAAATCT ATATTACCTG TGGAGACTAA ATAA
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| Protein sequence | MTMEKLSASS NFLDLGGLDS LRVQAQKDEK GALKEAAKQF EGIFIQMLMK SMRDANAAFK
SDNPMNSETT AFFEQMRDQQ MSVDLSNKGM LGLAEMMVQQ LDPDDSPITP ASVLRGNTDY
KVNPSMFVAP ATELDKDTLD IIAPKDQIAA SHSVIDSAES MRPMSAQLTN VLDGEQLNSV
LRGEQLASQA VQIGKVLPQA DVTLPKSKGI AVSQFTSPEH FISVLYPHAE KAAKSLGTSA
EVLIAQSALE TGWGQKVVRR NDGTMSHNLF NIKADKRWQG DKTSVNTLEF EKGIAVQQKA
DFRMYDNLEQ SFNDFVSFIS QGDRYQDARK VASEPTQFIK ALQKAGYATD PQYANKVINV
MKSVKEGLKS ILPVETK
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