Gene Sfri_1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1151 
Symbol 
ID4277860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1360676 
End bp1361122 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID638133925 
Producthypothetical protein 
Protein accessionYP_749842 
Protein GI114562329 
COG category[S] Function unknown 
COG ID[COG3018] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGT TGATGTTAAT TATGCTATTG CTGCTAACTG GCTGTGTGAG CAAAGATAAA 
TATGTTCAGT GGGAAACCGA AGCGCCAGCT TCATTCCCAA CACTAACGGC AATTGGTTAT
GCCCCGTTGG CGACCCAACC CAGTAAAGAG CCATCACATC GTATTTTAAT GGCGATGCAA
GCTTCAAAAA TTGCCGCTTA CCGAGAGTTG GCTGAGCAAG TATATGGACA AAAGATTTCG
GCAAATAGCG ACGTAAGTGA GTGGTTATTA ACTGACGACA ACGTTAAGTC TAGCGTGAGT
GGTATTATTC GCGGCGCTAA AGTGGTTAAG ACCTACCCTT CTGGTGAATT TTATGTCACG
GAGCTAGCAC TCGATTTTAA GCAAGTATGG CAGTTGTACG AACAACAAAA TCGCCCTAAA
CGCGTAAAAG AAGTTACTTA CTTTTAA
 
Protein sequence
MKSLMLIMLL LLTGCVSKDK YVQWETEAPA SFPTLTAIGY APLATQPSKE PSHRILMAMQ 
ASKIAAYREL AEQVYGQKIS ANSDVSEWLL TDDNVKSSVS GIIRGAKVVK TYPSGEFYVT
ELALDFKQVW QLYEQQNRPK RVKEVTYF