| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1143 |
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| Symbol | |
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| ID | 4278044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1349970 |
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| End bp | 1351109 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133917 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_749834 |
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| Protein GI | 114562321 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.702267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATT ATGAAGTATT AAGATTTATT TGGTGGGCGT TAATCGGCGT GCTGTTTATT
GGTTTCACCG TGACAGATGG CTTTGATATG GGCGTAGGTA TATTGTTACC CGTTATTGGT
AAAGATGATA CTGAACGCCG TATTATGATT AACACTATCG CACCACATTG GGACGGTAAC
CAAGTATGGC TAGTGACGGC TGGTGGCGCG TTATTTGCTG CTTGGCCTAT GGTCTACGCG
GTATCGTTTT CAGGCTTTTA TGTGGCAATG ATGCTAGTGC TATTTGCATT GTTTTTACGT
CCAGTCGGTT TTGATTATCG CTCTAAAATT GAAGACCCAA GATGGCGTAA GTCATGGGAT
AGAGCATTAT TTGTCGGCAG TTTTGTGCCA CCGTTAATCA TTGGTGTGGC ATTTGGTAAC
CTGCTTCAAG GCGTACCATT TAACTTTGAT GAATATCTAC GTGCTACTTA TCATGGCGGT
CTGTTGGGTT TATTGAATCC GTTTGGTTTA TTAGTCGGTC TTGTGAGTGT CACTATGGTG
ATAATGCAAG GTTCTACATG GTTACAAATG AAGACCGACG GAGAGCTGCG GGTTAGAAGT
GCTAAAGTAT CGCAAGTTTG TGGTGGTTTA TTAGTGGTTC TATTTGGTGC AGCTGGTGTT
TGGCTTGTAA ACGGTATTGA TGGTTATGTT ATTACCTCAG CCCTTGACCT TGCTGGTCCG
TCAAATCCAA CCACTAAGAC TGTAGCGGTT GAAGCGGGCG CTTGGTTAAC TAACTATGAT
AAATATCCTC TTACCATGCT ATTCCCGGTA TTAGGGTTAT TAATGCCAAT ATTAGTGATT
TTTGCCAGTC GATTAAATCG TAGTGGATTT GCGTTCTTTT TCAGTTCGCT AGCGGTTGCT
TGTGTCATTT TGACCTGTGG AGCAGCAATG TTCCCATTTG TTATGCCTTC ATCATTAGAA
CCTAATGTCA GCTTAACAAT GTGGGATGCT ACAGCCAGTC AAATGTCACT TAAAGTGATG
ACAGTTGCCG CTATTATCTT CGTACCCACA GTATTAAGTT ACACCATTTG GACTTACTAC
AAGATGTACG GCCGCTTAAA TCGTGAGTTT GTTGAAAACA ACAAAAGCTC ACTTTACTAA
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| Protein sequence | MFDYEVLRFI WWALIGVLFI GFTVTDGFDM GVGILLPVIG KDDTERRIMI NTIAPHWDGN
QVWLVTAGGA LFAAWPMVYA VSFSGFYVAM MLVLFALFLR PVGFDYRSKI EDPRWRKSWD
RALFVGSFVP PLIIGVAFGN LLQGVPFNFD EYLRATYHGG LLGLLNPFGL LVGLVSVTMV
IMQGSTWLQM KTDGELRVRS AKVSQVCGGL LVVLFGAAGV WLVNGIDGYV ITSALDLAGP
SNPTTKTVAV EAGAWLTNYD KYPLTMLFPV LGLLMPILVI FASRLNRSGF AFFFSSLAVA
CVILTCGAAM FPFVMPSSLE PNVSLTMWDA TASQMSLKVM TVAAIIFVPT VLSYTIWTYY
KMYGRLNREF VENNKSSLY
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