| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1136 |
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| Symbol | xseA |
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| ID | 4278037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1335999 |
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| End bp | 1337351 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133910 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_749827 |
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| Protein GI | 114562314 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000110023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACTC TCATGAGTGC CACAAAAAAC AATGTTTATA GTGTTTCGCA ATTAAATAGC
GAAGTGAGGC ATATTCTTGA AGGACAAATT GGCAAAATTT GGCTAAATGG TGAAATATCA
AACTTTTCGG CTCCAAGTTC AGGGCATTGG TATCTCACGT TAAAAGACGC TCATTCACAA
GTTCGCTGTG CCATGTTTAA GGGCCGTAAT CAATCTGTGC GCTTTAAACC CGTCAATGGT
CAACAAGTGT TGATTAAAGG CGCCATCAGT GTTTACGAGC CTCGTGGCGA TTATCAGCTG
CTACTAGAGT CAATGCTGCC AGCAGGTGAC GGACTACTCG CACAGGAATT TGAAGCGTTA
AAACTAAAAT TGGCCGCTGA AGGCTTATTT GCCCTAGAAA CCAAACGCCC TATTCCAACC
AATATCCAAC GAATTGGTGT CATCACATCG GCAACGGGGG CAGCGTTGCG AGATATCTTG
CATGTATTGG CACGCCGAGA TCCATCAATC GAAGTGGTTG TGTACCCAAC TCAAGTTCAA
GGTGCTACAG CCAGTCAATT AATCTGCCAA GCAATTGTCA CCGCCAATCA ACGCATGGAA
GTTGATGTGC TGTTGCTTAC CCGTGGTGGC GGTTCGTTAG AAGATTTATG GTGCTTCAAC
AGCGAACACT TAGCCCATGC GATTTACAAC AGTGCACTGC CTGTTGTTAG CGCGGTTGGC
CATGAAATAG ATACCACTAT CAGTGATTAT GTAGCCGATG TACGCGCCCC AACACCGTCA
GCCGGTGCTG AATTATTATC AAAAGACAAA GGCAATAAAG CAGAAAAGTT GGCGCTATTA
TTATCGCGTT TGCAGCAAGG GATGAAGCAT TACCAATTGC AGCAATATGG ACGATTAACT
CAGTTATCTC ATCAGCTTCA ACGCCATGAG CCGCAACATA AACTGCAGCA ATTTGAACAA
CGGTTTGACG AAATTCAAAT GCGCTTAGAA AATGCCTTAC AGCATAAACT CAGTCGCTTA
ACCTTACGCC ACCAGCAATT ACATAATCGT TTGCAACAAC GTTCACCAGT TAACACCTTA
ACCTTAGAAA AACAGCGGCT TGGCTATTTA ATTGAACGCT TTAACGACGC CAGTAAAGAC
TATTTTAAAC AGGCTGAATC ACGAGTTTCA CAAGCCGCCC ATAATCTTGA CACCGTCAGC
CCACTGGCAA CCTTAAGCCG AGGTTATTCA ATCACAAGTA CCAATGAGCA TGTTATCGAA
AATGCCAATC AATTAAGCAA TGGTGATGTT ATTCATACTC GGTTAAAGCA AGGAAGTGTC
ACCTCCACCG TGACAGATGT TTCAACTAAA TAA
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| Protein sequence | MRTLMSATKN NVYSVSQLNS EVRHILEGQI GKIWLNGEIS NFSAPSSGHW YLTLKDAHSQ
VRCAMFKGRN QSVRFKPVNG QQVLIKGAIS VYEPRGDYQL LLESMLPAGD GLLAQEFEAL
KLKLAAEGLF ALETKRPIPT NIQRIGVITS ATGAALRDIL HVLARRDPSI EVVVYPTQVQ
GATASQLICQ AIVTANQRME VDVLLLTRGG GSLEDLWCFN SEHLAHAIYN SALPVVSAVG
HEIDTTISDY VADVRAPTPS AGAELLSKDK GNKAEKLALL LSRLQQGMKH YQLQQYGRLT
QLSHQLQRHE PQHKLQQFEQ RFDEIQMRLE NALQHKLSRL TLRHQQLHNR LQQRSPVNTL
TLEKQRLGYL IERFNDASKD YFKQAESRVS QAAHNLDTVS PLATLSRGYS ITSTNEHVIE
NANQLSNGDV IHTRLKQGSV TSTVTDVSTK
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