Gene Sfri_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1109 
Symbol 
ID4277172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1309638 
End bp1310171 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content39% 
IMG OID638133883 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_749800 
Protein GI114562287 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCAATC TTATCGATTG GTCTTTTTTT ATGAAAAACT CAATAAATCA ACCTCATCAA 
ATCGTTGATT TTTCTGCATC ATATGCAACT CAAATAAGTG AGTTATACCA TACTGCGGTA
CAAGGTATTA TTCATCCAAG ATACCCAAGC ATAAAACTCA ACGCATGGTC ATCAGCACCG
CGCTCTACTA AATTTTGGCA ACTACGATAC AAACGAAATA AAGCCTGGTT AGCACTTGAT
AACCAACAGG TCATCGGCTT CATTAGTCTA GAAACTCATT TTAAGCACCA AGGTTATATT
GACTGCTTAT ACGTTCACCC CGACTATCAG CAGCAAGGCA TCGCCAGCGC ACTCTATAAA
CACTTACAAC ATTGGGCTCT TCAGCAACAA TATCCTTACC TCAATGTTGA TGCGTCATAC
TTATCTAAAC CGTTGTTTGA AGCAATGGGA TTTGTTTTGC AACAGACAAG CTACCAACAA
AAATGTGGCC AAACGTTTAC CGGCTTTTAC ATGAAAAAAC GGATAATAGA CTAG
 
Protein sequence
MTNLIDWSFF MKNSINQPHQ IVDFSASYAT QISELYHTAV QGIIHPRYPS IKLNAWSSAP 
RSTKFWQLRY KRNKAWLALD NQQVIGFISL ETHFKHQGYI DCLYVHPDYQ QQGIASALYK
HLQHWALQQQ YPYLNVDASY LSKPLFEAMG FVLQQTSYQQ KCGQTFTGFY MKKRIID