| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1061 |
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| Symbol | |
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| ID | 4277823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1248096 |
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| End bp | 1250681 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133829 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_749752 |
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| Protein GI | 114562239 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTGA TTGATACCAG CGATTTAGAA AAACACACCC CGATGATGCG CCAGTATTTG
GGCTTAAAAG CGGCCCATCC TGATATGTTA TTGTTTTATC GAATGGGTGA TTTTTATGAG
CTGTTTTACG ATGACGCTAA ACGCGCTTCT GAAATGCTAG GTATTTCACT GACGGCTCGT
GGAAAAAGCG GCGGAGACCC GATTCCCATG GCAGGCATTC CATATCACGC CGTCGAAGGC
TATTTAGCAA AATTAGTTAA CATTGGTCAG TCTGTGGCTA TTTGTGAGCA AATTGGTGAT
CCAGCGACAT CGAAAGGGCC CGTTGAACGC CAAGTGGTGC GTATTGTGAC CCCTGGCACC
TTAACCGACG AAGCTTTACT GCAAGAAAAA CAAGACAATT TACTGGCGGC ACTGTATCAG
GGTAAAACGG GTTTTGGTTA CGCGACGTTG GATATTTCAT CAGGTCGTTT TGTGGTTGCT
GAATTACCCA CTCGTGAAGC TTTAGAAGCC GAATTACAAC GCACTAATCC AGCTGAGCTA
CTGTACAGTG AAGATTTTAC TGACATGTTA TTGATCAATA ATATGAAAGG CATCCGTCGT
CGCCCTGAGT GGGAGTTTGA CTACGACACC TGTATTAATT TACTGCTCAA TCAATTTGGC
ACCAAAGATT TACACGGTTT TGGAATTACT GATGCACGAT TAGCGTTACA AGCTGCAGGT
TGTTTAATGC AGTATGTCAA AGATACCCAA AAGATGGCGT TGCCACATAT CAACTCGATT
GTGCGCTTTA ATCAATCAGA ATCAATTATT TTAGATGCCG CAACCAGACG TAATTTAGAG
TTAACTCAAA ATTTATCTGG TGGGCGGGAG AATACTCTCG CATGGGTATT GGATAATACT
GCCACCCCTA TGGGTAGCCG TATGTTACAA CGTTGGATCC ATGAGCCATT ACGCAATCGT
CAAACAATTC AATATCGACA TAGTGCGGTC AGTGAACTGA TTGAACAAGA TTTGTATCAA
ACGTTACATG AGCAACTAAA AAGCTTAGGT GATATCGAAC GTATTATGGC TCGTTTAGCA
CTACGTAGTG CCAGACCACG TGATTTTTCA CGCTTAAAGC AAGCACTAAC GCTTCTGCCT
GAAATCCAGC AAACATTAGC AATATGCCAA CAACCTCGAT TAAACACGTT AGTACAATTA
CTGGGTGAAT TTCCTGAACA ACACGATTTA TTAGAACGCG CTATTGTAGA CAACCCTCCC
ATGTTAATTC GTGATGGTGG CGTTATCCGT ACTGGCTATA ATAATGAGTT AGATGAATGG
CGCAAGTTGA GTGAAGGCGC CAGTGATTAT TTAGTCGAAC TTGAAGCTCG TGAGAAACAA
CAAACAGGGA TTAATACCTT AAAAGTCGGC TATAACCGAG TTCATGGTTA CTATATTGAA
GTGAGCCGTT TACAGTCAGA TAGAGTGCCA CTGAGCTATC AGCGCCGCCA AACACTCAAA
GGCACCGAAC GTTATATCAC CCCAGAATTG AAAGAATACG AAGAGAAAGT ACTGTCTAGC
CAGGGCAAAG CACTCGCGCT TGAAAAACAA CTGTGGGAAC AACTGTTTGA CTTGTTGTTA
CCTAAACTAC AAGAATTACA GCAGTTTGCA ACGGCTGCTG CCGAGTTAGA TATATTAAGT
AACTTTGCCG AACGAGCAGA GTTATTTAAT TATCAATGCC CACAAATGAG CCACGACATT
GGCATTAATA TTGAAGCGGG CCGCCATCCT GTCGTTGAGC GAGTTAGCCA AGCAGCGTTT
ATTGCTAACC CAGTTGCATT AACACCACAG CGCCAAATGC TTATTGTTAC AGGCCCAAAT
ATGGGCGGTA AATCAACCTA TATGCGCCAA GTAGCATTGA TTACATTAAT GGCACATATC
GGCTGTTTCG TTCCAGCAGA CCATGCTCAA ATTGGTGAAA TCGACCGGAT TTTTACCCGT
ATTGGTGCAT CAGATGATTT GGCATCAGGC CGGTCAACTT TCATGGTTGA AATGACCGAA
ACAGCTAATA TTTTACATAA TGCGACTGCG AACAGTTTAG TGTTAATGGA CGAAATCGGT
CGCGGCACCT CAACCTATGA TGGTTTGGCA CTCGCTTGGT CTGCTGCTGA ATATCTTGCG
AAAAACGTCA GTGCCCTGAC ATTATTTGCT ACTCATTATT TTGAGTTAAC CCAATTGCCC
GAGCTGTTAC CGTCAGTAAT TAATGTGCAT TTAGATGCAA TAGAACACGA CGACACAATT
GCCTTTATGC ATTCGGTACA AGAAGGTGCT GCAAGTAAAA GTTATGGTCT ACAAGTTGCA
GCCCTAGCGG GTGTTCCGGC CTCCGTCATT AAAGCGGCAA AACATAAGCT TCATCAACTG
GAAAACCGAG ATATGACATT ATCTCAACAG AATCCAACTC AAGTGAGTAT GAACTTATTA
CCTCCAATTC CAGAGCCATC ACTAGCACTG GAAAAGTTAG CCCAAATTAA TCCAGACGAG
TTGACGCCGA AGCAGGCTTT AGATTATTTG TATGAATTGA AGCGATTAAG TCACACGAAC
ACCTAG
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| Protein sequence | MTVIDTSDLE KHTPMMRQYL GLKAAHPDML LFYRMGDFYE LFYDDAKRAS EMLGISLTAR
GKSGGDPIPM AGIPYHAVEG YLAKLVNIGQ SVAICEQIGD PATSKGPVER QVVRIVTPGT
LTDEALLQEK QDNLLAALYQ GKTGFGYATL DISSGRFVVA ELPTREALEA ELQRTNPAEL
LYSEDFTDML LINNMKGIRR RPEWEFDYDT CINLLLNQFG TKDLHGFGIT DARLALQAAG
CLMQYVKDTQ KMALPHINSI VRFNQSESII LDAATRRNLE LTQNLSGGRE NTLAWVLDNT
ATPMGSRMLQ RWIHEPLRNR QTIQYRHSAV SELIEQDLYQ TLHEQLKSLG DIERIMARLA
LRSARPRDFS RLKQALTLLP EIQQTLAICQ QPRLNTLVQL LGEFPEQHDL LERAIVDNPP
MLIRDGGVIR TGYNNELDEW RKLSEGASDY LVELEAREKQ QTGINTLKVG YNRVHGYYIE
VSRLQSDRVP LSYQRRQTLK GTERYITPEL KEYEEKVLSS QGKALALEKQ LWEQLFDLLL
PKLQELQQFA TAAAELDILS NFAERAELFN YQCPQMSHDI GINIEAGRHP VVERVSQAAF
IANPVALTPQ RQMLIVTGPN MGGKSTYMRQ VALITLMAHI GCFVPADHAQ IGEIDRIFTR
IGASDDLASG RSTFMVEMTE TANILHNATA NSLVLMDEIG RGTSTYDGLA LAWSAAEYLA
KNVSALTLFA THYFELTQLP ELLPSVINVH LDAIEHDDTI AFMHSVQEGA ASKSYGLQVA
ALAGVPASVI KAAKHKLHQL ENRDMTLSQQ NPTQVSMNLL PPIPEPSLAL EKLAQINPDE
LTPKQALDYL YELKRLSHTN T
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