| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1058 |
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| Symbol | |
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| ID | 4278223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1244993 |
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| End bp | 1245628 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133826 |
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| Product | protein-L-isoaspartate O-methyltransferase |
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| Protein accession | YP_749749 |
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| Protein GI | 114562236 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.939702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACGCG TAGCTTCTAC ATCAGCAATG AATTTAGCCA AAAAATTGGC CGAAGCAGGG
ATCCGACATC CTGCGGTATT GCATGCTGTA GCAACAACAC CACGTGAATT GTTCCTTGAT
GGTGCATTAG CTCATAAAGC GTATGAGAAT ACTGCATTAC CTATCGGACA GGGACAGACA
ATTTCGCAGC CTTATATTGT GGCTCGAATG ACTGAACTGC TGCTGCAGCA CAATCCTCAA
AAAGTGTTAG AGATTGGCAC TGGCTCAGGT TACCAAGCAG CTGTTTTAGC ATCGCTAATT
CCTGAGCTTT TCACAATTGA GCGTATAAAA GCATTACAAA TACAAGCTCG TCAAAGATTA
AAACGTCTAG ATTTACACAA TGTCGCATTC AAATATGGTG ATGGTTGGCA AGGGTGGTCA
AACCGTGGAC CATTTGATGG AATAATGGTG ACAGCTGCAG CTGCAACAGT ACCTCAAGCA
TTGCTTGAAC AATTGTCCGA GCATGGCGTA TTGATTATTC CGGTAGGAGA AGACACCCAG
CAATTACTCA AAATTACCCG TATCGGACAG ACATTCCAAT CTGAGATTAT AGAGGCTGTT
AAATTTGTAC CTCTTATTAA TGGAGATTTG GCTTAG
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| Protein sequence | MTRVASTSAM NLAKKLAEAG IRHPAVLHAV ATTPRELFLD GALAHKAYEN TALPIGQGQT
ISQPYIVARM TELLLQHNPQ KVLEIGTGSG YQAAVLASLI PELFTIERIK ALQIQARQRL
KRLDLHNVAF KYGDGWQGWS NRGPFDGIMV TAAAATVPQA LLEQLSEHGV LIIPVGEDTQ
QLLKITRIGQ TFQSEIIEAV KFVPLINGDL A
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