| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1043 |
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| Symbol | |
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| ID | 4278208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1226761 |
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| End bp | 1228419 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133811 |
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| Product | recombination and repair protein |
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| Protein accession | YP_749734 |
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| Protein GI | 114562221 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTGCC AACTCAGCAT CAACAACTTT GCTATAGTAC GCTTTTTAGA ACTCGACTTT
AAAGCCGGTA TGACAAGCAT CACCGGCGAA ACAGGTGCAG GTAAATCGAT TGCTATCGAT
GCGCTTGGAT TATGTCTTGG TAATCGAAGT GATGCCAACA CTGTCAGGCC TGGAGCCACC
AAAACTGAAG TAAGTGCACG ATTTACCCTT CATGATGTTC CTTTAGCCAA ACGCTGGCTT
GAAGATAGCG ATCTTGATGC TGAAGATGAG TGTATATTGC GTCGAACCAT TAACAGTGAT
GGCCGCTCAA GAGCCTACAT AAATGGTAAT CCTGTGCCTG TGACGCAATT AAAAGCCATC
GGACAACTAT TGATTGGTGT TCACGGCCAA CATGCACATC ACGCAATGCT TAAAAGCGAG
CATCAATTAA ACCTACTCGA CCACTATGCT AACCACAAAA TACTGCTTGA TAGCGTTAGC
GCTAGCTATC AACGCTGCAA ACAAGTGGAA AACGAGCTAA AGCATCTTGA GCAAGCTCAG
CACGAACGCA TTTCGCGTCA ACAGCTACTG CAATATCAAG TAGAAGAGCT TAATGAGTTT
AACTTAGGCT TGGAAGAATT TGATGAAATA GAACAAGAAC ACAAACGCTT AGCCAATGGC
ACAGATTTAA TTGAACGTTG CCAAGCAGGG TTACACTTAT TGACCGAAAG TGATGAAGGC
AATATAGAAT CTCTGCTTAA TAAAGTAGCC AGCATTGCTG ATACGCTTCA AGGTTATGAT
GAATCCCTTG CACCTATTGG TACTATGATT AGCGATGCGT TAATTCAAGT ACAAGAAAGC
GCTAGCGAAA TTGAAAGTTA TTTAAGCAGT TTAGAACTTG ACCCAGAACA TTTTGCCTAT
TTAGATAAAC GCCTTTCAAC GGCAATGCAA TTGGCGCGTA AGCATCATGT GAGTGCAGAT
AAGTTGGCGC TACATCATCA AGCATTGATG AATGAATTAA CCGAACTTGC TGACGATGAA
ACTAAATTAG ATGGTATAAG ACAACAACTT GAAGCCACCA GAAATGCCTA TTTAACCAAT
GCACAAAAAC TGAGTCAAAG TCGTAGTCGT TATGCCAAAG AATTAGACAA GCTAGTCACT
CAGTCTATCC ATGAGCTCAA TATGCCTAAG GGTAAATTTA CCATTCAGAT TAATCATAAT
CCGGACAACA TTTCAGTTAA TGGCTGCGAT AGCATTGAAT TTATGGTTAC CACGAACCCT
GGGCAACCAT TACAACCGAT TTCTAAAGTA GCCTCTGGCG GTGAGTTATC GCGTATTGGA
TTAGGTATTC AAGTGATCAC AGCTAAAAAA GTCGCCACTC CAACACTCAT ATTCGATGAA
GTTGATGTGG GTATTTCTGG ACCAACAGCA TCTGTCGTCG GTCGTATGTT ACGTAGCCTT
GGTGAGTCGA CTCAAGTGTT ATGTGTCACC CATTTGCCGC AAGTTGCAGG TAATGGCCAT
CAACATATGT TTGTGAATAA ATTTAATAAA GGTGGCAACA CCGAAACGAC CATGCAGACC
TTAGATAAAG ATCAACGGGT GAATGAACTT GCACGCTTAT TAGGTGGTGA TGTCATTACA
GAAAATACCT TGGCTAATGC CCGTGAGCTG TTGCAATAA
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| Protein sequence | MLCQLSINNF AIVRFLELDF KAGMTSITGE TGAGKSIAID ALGLCLGNRS DANTVRPGAT
KTEVSARFTL HDVPLAKRWL EDSDLDAEDE CILRRTINSD GRSRAYINGN PVPVTQLKAI
GQLLIGVHGQ HAHHAMLKSE HQLNLLDHYA NHKILLDSVS ASYQRCKQVE NELKHLEQAQ
HERISRQQLL QYQVEELNEF NLGLEEFDEI EQEHKRLANG TDLIERCQAG LHLLTESDEG
NIESLLNKVA SIADTLQGYD ESLAPIGTMI SDALIQVQES ASEIESYLSS LELDPEHFAY
LDKRLSTAMQ LARKHHVSAD KLALHHQALM NELTELADDE TKLDGIRQQL EATRNAYLTN
AQKLSQSRSR YAKELDKLVT QSIHELNMPK GKFTIQINHN PDNISVNGCD SIEFMVTTNP
GQPLQPISKV ASGGELSRIG LGIQVITAKK VATPTLIFDE VDVGISGPTA SVVGRMLRSL
GESTQVLCVT HLPQVAGNGH QHMFVNKFNK GGNTETTMQT LDKDQRVNEL ARLLGGDVIT
ENTLANAREL LQ
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