| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1040 |
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| Symbol | |
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| ID | 4277854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1223957 |
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| End bp | 1224913 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133808 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_749731 |
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| Protein GI | 114562218 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000743717 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAGAAT TCCAACTCAT CGAACATTAC TTCCGCAATA AAGGCCTAAA AAGGCGCGAT
GTTGAGTTAA GCATCGGCGA TGACTGTGCG TTAGTGAATC CTGCAGACAA TAAATCGTTA
GCGATTTCTT GTGATACCCT TGTTGAAAAC GTCCACTTTT TAGCAGACAT TCCTGCTCAT
GCTTTAGGTT ATAAATCGTT AGCGGTTAAC CTTTCTGACC TCGCCGCAAT GGGAGCTGAA
CCTGCCTGGT TTACCTTAGC GTTGACCTTG CCTGATGTTG ACCAGCCTTG GTTAGCACAT
TTCAGTGAAG GTCTGTTCGA GATTGCAGAA TATTATGGTA TTGCCTTAAT TGGTGGTGAT
ACTACCCGTG GACCTCGCAG CATCAGTATT ACGATTAATG GCCAAGTTCC TAAAGGTACT
GCATTAACCC GTGATGGTGC AAAAATAGGT GATTGGGTTT ATGTGACAGG CACATTAGGT
GACTCAGCTT TAGGTCTTGA TATCCTCAGA GGAGTCAAAA CAGTTAACAC TGAAGATAAA
GAATATCTAA TTAATCGTCA TTATTACCCA ACGCCTCGTG TTTTAGCAGG CCAAGCGCTT
CGTACACTCG CCACCAGTGC TATCGATTTA TCAGATGGCT TAATGTCTGA CATTGGGCAT
ATATTAACGG CATCAAAAGT GGGCGCCGTC ATCGATGTGA ATCAAATTCC GTTATCAAAC
TCAATTAAAG CCAATCTCAG CCATGAAGAT GCATTAAGTT ATGCACTTAC TGGTGGTGAA
GACTACGAGT TATTGTTTAC GGTTCCTGAG TCTCAACGTG GCGCAATTGA TACAGCGTTA
ATTCATGCTG GTGTAAAATT TGTTAAAATT GGCCAAATCA GTGCAGGTGA TAAATTAAAA
CTAGTAGAAA ATGGGCTAGA ATTTAACCCA ATTTCACGTG GCTTTGTGCA TTTTTAA
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| Protein sequence | MKEFQLIEHY FRNKGLKRRD VELSIGDDCA LVNPADNKSL AISCDTLVEN VHFLADIPAH
ALGYKSLAVN LSDLAAMGAE PAWFTLALTL PDVDQPWLAH FSEGLFEIAE YYGIALIGGD
TTRGPRSISI TINGQVPKGT ALTRDGAKIG DWVYVTGTLG DSALGLDILR GVKTVNTEDK
EYLINRHYYP TPRVLAGQAL RTLATSAIDL SDGLMSDIGH ILTASKVGAV IDVNQIPLSN
SIKANLSHED ALSYALTGGE DYELLFTVPE SQRGAIDTAL IHAGVKFVKI GQISAGDKLK
LVENGLEFNP ISRGFVHF
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