Gene Sfri_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1037 
Symbol 
ID4277851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1221748 
End bp1222851 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content43% 
IMG OID638133805 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_749728 
Protein GI114562215 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000192302 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTAC ATAGCATAGA AGAAATCATT GAAGATATTC GTCAAGGTAA GATGGTTATC 
TTGATGGATG ATGAAGACAG AGAGAATGAA GGTGATTTGA TCATGGCCGC TGATAAAGTG 
ACGCCAGCAG CAATCAACTT CATGGCAACC TATGGCCGTG GATTAATTTG CCAAACAATG 
ACCAAAGAGC GTTGTCAGCA GCTTAATTTG CCTTTAATGG TTACCAATAA CAATGCCCAG 
TTCTCGACGA ATTTTACCGT GTCAATTGAA GCGGCTACTG GAGTCACAAC AGGTATTTCT 
GCTCATGACC GTGCAGTGAC TGTACAAGCT GCTGTTGCCA AAGACGCCAA AGCCTCTGAT 
TTAGTGCAAC CTGGGCATAT TTTTCCGTTG ATGGCACAAG AGGGCGGAGT ATTAATACGC 
GCTGGTCACA CTGAAGCCGG TTGTGATTTA GCACGCTTAG CTGGCTGTGA GCCTTCTGGT 
GTGATTGTTG AAATTTTAAA CGAAGATGGC ACCATGGCGC GCCGGCCCGA TTTAGAAATA 
TTCAGTGAAA AGCATGGGAT TAAAATCGGT ACTATTGCCG ACTTAATTGA ATACCGTAAT 
ACGAATGAAA CCACGGTTGT ACGCGAAGCT CAGTGTAAAT TACCGACTCG TTTTGGTGAG 
TTTACTATGG TGACCTTCAG AGACACTATC GATAATCAAC TACACTACGC CTTGATTAAA 
GATGACGTAA AACCGAATTG CTTAGTACGA GTGCATTTAC AAAATACCTT CAATGATTTA 
CTGCATTCGG AACGTGATCA AAAGCGCAGT TGGCCATTAG AAAAAGCCAT GGAGCGGATA 
GCTTCAGAAG GTGGTGTTTT AGTGTTATTG GGTAATGATG AACATACGAG TAATTTATTG 
GCCAAAGTAA AAGCGTTTGA AGCTGAAGAC AATGGTCAAT CTCCAGCGCC AGCTATGTGG 
CAAGGAACAT CTCGTCGTGT TGGCGTAGGC TCGCAAATTC TGTCGAGTTT AGGTGTCAGC 
ACTATGCGTT TACTCAGTTC GCCAAAACGT TATCATTCAC TGTCTGGTTT CGGTTTAGAA 
GTGACTGATT ATATAGCTGA ATAA
 
Protein sequence
MALHSIEEII EDIRQGKMVI LMDDEDRENE GDLIMAADKV TPAAINFMAT YGRGLICQTM 
TKERCQQLNL PLMVTNNNAQ FSTNFTVSIE AATGVTTGIS AHDRAVTVQA AVAKDAKASD 
LVQPGHIFPL MAQEGGVLIR AGHTEAGCDL ARLAGCEPSG VIVEILNEDG TMARRPDLEI 
FSEKHGIKIG TIADLIEYRN TNETTVVREA QCKLPTRFGE FTMVTFRDTI DNQLHYALIK 
DDVKPNCLVR VHLQNTFNDL LHSERDQKRS WPLEKAMERI ASEGGVLVLL GNDEHTSNLL 
AKVKAFEAED NGQSPAPAMW QGTSRRVGVG SQILSSLGVS TMRLLSSPKR YHSLSGFGLE 
VTDYIAE