| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1033 |
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| Symbol | glyA |
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| ID | 4277847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1217872 |
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| End bp | 1219125 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133801 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_749724 |
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| Protein GI | 114562211 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.414818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAGA AAGCGATGAA TATTGCGGAT TATGATCCAG AATTATTTAA AGCCATTGAA
GATGAAACTT GTCGTCAAGA AGAACACATT GAATTGATTG CGTCTGAAAA CTATACCAGT
CCACGTGTGA TGGAAGCGCA AGGTTCACAG TTAACTAACA AGTATGCTGA AGGTTATCCA
GGCAAGCGTT ATTATGGTGG GTGCGAATAC GTTGATGTTG TTGAAACATT GGCTATTGAA
CGCGCAAAAG AATTATTTGG TGCAACTTAT GCCAACGTAC AGCCTCACTC AGGCTCGCAA
GCAAACAGCG CAGTATTTAT GGCGTTGTTA CAACCGGGTG ATACCGTTTT AGGGATGAAC
CTTGCTCATG GTGGTCATTT GACCCATGGT TCACCAGTGA ATTTTTCTGG CAAGCTTTAC
AACATCATTC CTTACGGTAT CGATGAAGCT GGCAAAATTG ATTATGACGA AATGGAACGC
TTAGCCATTG AGCATAAGCC TAAAATGATT ATCGGCGGAT TCTCTGCATT CTCAGGTATT
GTTGATTGGG CAAGAATGCG CGAAATTGCA GACAAAATTG GTGCATACTT ATTTGTTGAT
ATGGCACACG TAGCAGGCTT AATTGCTGCT GGTGTTTATC CAACGCCAGT TCCTCATGCA
CACGTGGTTA CGTCTACAAC TCATAAAACA TTAGCGGGTC CTCGTGGCGG GATTATTATT
TCTGCAGCCG ATGATGAAGT GTTGTATAAG AAGTTGAACT CAGCGGTATT CCCGGGTGGC
CAAGGTGGTC CTTTAATGCA TGTTATCGCG GGTAAAGCGG TTGCATTTAA AGAAGCATTA
GAGCCAGAAT TCAAAGTATA CCAGCAGCAA GTGGTTAAAA ACGCGAAAGC CATGGTTGAA
GTGTTTTTAG CTCGCGGTTA TAAAATCGTT TCTGGCGGTA CTGAAAACCA TCTAATGTTG
GTTGACTTAA TTGGTCGTGA TTTAACCGGT AAAGAAGCTG ATGCCGCATT AGGCAGCGCA
AACATTACTG TTAATAAAAA CTCTGTGCCT AACGATCCTC GTTCACCGTT TGTTACCTCT
GGTATCCGTA TTGGTTCGCC AGCAATCACT CGTCGTGGCT TTAAAGAAGC AGAAGCGAAA
GAATTGACCG GTTGGATTTG TGACATTCTT GATGATGCAA CTAATACTGT TGTAACCGAC
CGCGTCAAAG GCCAAGTTTT AGCCTTATGT GCTCGATTCC CTGTATACGG TTAA
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| Protein sequence | MLKKAMNIAD YDPELFKAIE DETCRQEEHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP
GKRYYGGCEY VDVVETLAIE RAKELFGATY ANVQPHSGSQ ANSAVFMALL QPGDTVLGMN
LAHGGHLTHG SPVNFSGKLY NIIPYGIDEA GKIDYDEMER LAIEHKPKMI IGGFSAFSGI
VDWARMREIA DKIGAYLFVD MAHVAGLIAA GVYPTPVPHA HVVTSTTHKT LAGPRGGIII
SAADDEVLYK KLNSAVFPGG QGGPLMHVIA GKAVAFKEAL EPEFKVYQQQ VVKNAKAMVE
VFLARGYKIV SGGTENHLML VDLIGRDLTG KEADAALGSA NITVNKNSVP NDPRSPFVTS
GIRIGSPAIT RRGFKEAEAK ELTGWICDIL DDATNTVVTD RVKGQVLALC ARFPVYG
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