| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1026 |
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| Symbol | |
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| ID | 4277840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1203954 |
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| End bp | 1204766 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133794 |
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| Product | amino acid ABC transporter |
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| Protein accession | YP_749717 |
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| Protein GI | 114562204 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTAA TACGTTACAA AAAAACAACT TTTGATTACA CTTTTATGCC CAAACGAGTT
CGTTTATTTA TCTACTTGCT ATTCATATCA GTGAGCGTTA TATACACATT TAACTCGACC
ATCACAGTGG CAGAACCATT AAAAATCACT TTAGCTGCAG AAGACAGTTG GCCTCCTTTT
GCTGATGAAG TGGGCAATGG CATTTCTCAT AACCTTATCA AACAGGCTTT TAAACAAGTT
GATGTTGACG TTTCTACTAT TGTTGTACCC TATGCTCGAG GTTTGATTAT GACCGAGCGA
GGTTCAGTTG ATGGCGTTTT TAATGTGACA AAAGAACAAA GCACTATTGA TCGATTTATA
TTCGGTAATG AACCTTTGTT TACGGTAACC GCTTCTTTTT TCTTTGCTAA AGAGCACCCT
ACCATTGCGG ATAATAAATG GCAGATCCCA ACAAAAAGTA CTATTGGTAT TGTGAATGGT
TATGAGTACG GCGACGAATT TACGACGCTT ATTGAACAAC AACAACTGCA AGTCATCACG
GTGAATAACC AGCGCCAACT AATCAATTTG TTATTGGTCG GCAGAATTGA TACCGCCATT
ATGTATGATC TTGTTGCTGA TGTTTATATC AAACAAATGG GTGTTAGCCA TGACATAAAA
GCTAAGTTTA ATAATCATAC CAGTAAAATT TTTGTCGCAT TTTCTAAACT TAACCCTCAA
GCTGAGCACA TTAGCCAATT ACTCGACAAA GGGCTGCTAA CGTTACAAAA ACAAGGTAAG
TACCAGCAAC TGCTTCTGCC CTCAAATGAT TAA
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| Protein sequence | MSLIRYKKTT FDYTFMPKRV RLFIYLLFIS VSVIYTFNST ITVAEPLKIT LAAEDSWPPF
ADEVGNGISH NLIKQAFKQV DVDVSTIVVP YARGLIMTER GSVDGVFNVT KEQSTIDRFI
FGNEPLFTVT ASFFFAKEHP TIADNKWQIP TKSTIGIVNG YEYGDEFTTL IEQQQLQVIT
VNNQRQLINL LLVGRIDTAI MYDLVADVYI KQMGVSHDIK AKFNNHTSKI FVAFSKLNPQ
AEHISQLLDK GLLTLQKQGK YQQLLLPSND
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