| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1018 |
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| Symbol | |
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| ID | 4277133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1191486 |
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| End bp | 1194164 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133786 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_749709 |
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| Protein GI | 114562196 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCATT CCATAAAAAA GACTTATCTC GTATTCACTA TGCTATTAGG GTTTATCCTT
TTAGCTGGGT GTAATGGAGA CAATAATAAC GACAATAGTA ATAACGACAA TAACGGTGTG
CTACTCACAT CAATTGCGGT TACTCCTGCC ACCCCTAGTA TGCCACTAGG CTTAAAGCAA
CAGTTCACAG CTATGGGCAC CTATTCGGAT GGCACATCAT CTGATATCAC CAACTCAGCA
ACTTGGTCAT CTGATGACTC TACAGTTGCC ACTATCAATG GCAGCGGTCT AGCCATGGGA
GTTATCCCTG GTTCAGTTGC TATCACAGCA TCCCTTATAG ACTCATCATC AAACGAGCAA
TCCGCAACGA CCACGCTAAC TATCACTGAT GCGACCTTAA CGGCTTTGGC TATCACACCA
GTCAACCCTA GCCTAGCTAA GGGTCTGACC AAACAATTTA TGGCCACAGG CACTTATTCG
GATGGCACTT CCCCAGATGT TACCACTTCA GTAACGTGGT CATCGGCTAA TACGCTAGTT
GCCACAGTGA ATGCAAGTGG TCTTGCTAGT GGAGTTGCCA TTGGATCTTC GATTATTACC
GCATCGTTAG GTTCTGATGA AACAACGACT GAACTCAATA TCACAGATGC TATTTTGAGT
TCAATAGCGT TAACGCCGGT TGAACCAAGC ATTGCCAAAG GCATAACCCA GCAGTTTACT
GCTATCGGTA CTTATTCCGA TGGTATCTCT GTTGATATTA CCGCTTCGTC AAACTGGTCA
TCTGCGGATA CACTGGTTGC CACAATGAAT ACCAGTGGGG CAGCTAAAGG AGTTAGCATA
GGTTCATCTA TTATTACGGC GGATTTTCAA GCTCAATCAG CAACTTCATT GCTGACAGTG
ACTGATGCCA GCTTAACGTC AATCATGTTA ACACCTGCCA ACCCACATAT TCCTAAAGGT
AATACCCTTC AGTTGACTGC TACTGGTATT TACTCGGATG GGATCTCTGT TGACATAACT
AGCTCTGCAA TCTGGTCATC AGCTGATACC CTTATTGCGA CAGTAAATGC CGATGGTGTA
GTCAGTGGTA TTACTTCAGG TTCAGCTATT ATTACCGCAA CATCAGCTGC GCTGTCGGCC
ACAACTACTG TAACAGTTAC TGATACAACG TTGACTTCAA TTGCGGTAAC ACCAGGAAAT
CAAACCATAG TTAAAGGTTC GAATAAACAG TTAACCGCTA CAGGAACTTA TTCAGATGGT
TCGCTAGCTA ATATTACTGC CTCTGTAACT TGGTCATCAG CAGATACCTT AGTTGCCACA
GTAAATAATT CTGGACTAGC TAGTGGTATC GAAACTGGCT CATCGCTAAT TAGTGCAAGC
TCAGGTGCTT TATCCGGTAG TACCAATTTA ACAATTACCG GCGCAGCTTT GAACTCAATT
GTGGTATCGC CAACCAATTT AAGCCTTGTT AAAGGTATGA ACAAGCAGTT TGCTGCAACC
GCTACTTATT CTGATGGATC TGTAGCAGAT ATTTCGACCT CGGTTACCTG GTCATCTGCT
GATACCTTGG TTGCTACAAT TGATGTCAAT GGTCTTGCGA ATGGCAAGGC GGCTGGCTCA
TCACTTATTA CCGCAACTTC AGGTGCACAA TCAAACAGTA CTAACTTAAC CGTTACCGAT
GCCACCTTGA ATTCGATTGA TGTAACACCA ATTAATCCAA GCATTATTAA AAACTCAAGC
CAAAACTTTG TGGCTACTGG GCATTATTCA GACGGTAGTA CAACAAATAT TACCTCGACA
GTGATGTGGT CTTCAGCTGA TACACTAGTT GCTACATTGA ATCCCAATGA ACAGCTAAAT
AGCGGGCGTG CCACAGCTAT TGAAGTAGGC TCATCGGTGA TTCAAGCATC ACTAAGTGGA
GTATTTGCGG ATACAACACT TAATGTTACT GCTGCCCTAC CAAACAACCC ACTAGCACCA
GAATTGGGTG AAGTGGCGCG TTTTGCCATG CTTGCCTCAC AAGCCATTAC TACCACGAGT
GGTTCTGCCA TTGTTGATGG TGATTTAGGT ATTCTTGACC AGGCACGTTC TTATTACGCA
GGATTTACTC CTGGCGTTAA TGCTGGCGAA TTTGACGAAT TAACCAATGG TTTGTCTTAT
GCTGGCGACG ATAGTACTCC CCCCTATGTT GTTCCTGTGC CTTATGCATC TATGGTCGCA
TTTATTAACC AGTCCAGAAC GGATCTTGGT ATTGCATATA ACTTCCTAGC TGCAGATCCT
AACCCAAACG CAGCGACTCA GGTTTGTCCT ATTGAATTGG GGAATCTGAC TCTGACTCGT
GGTGTCTATA AAACTGCAGC TGATGTGACC CTCCAAACAG GCACTCTCAC CCTTGATGGC
GAAGGAGATC CTGATTCGGT GTTTATTTTC ACCATAGGCG GAAACCTGAC ATCTGGTGCT
CCAGGTGGCG ACATTGTGCT CATTAATGGC GCACAAGCAA AGAATATCTA TTGGAGAACA
GCCGGAAAAA CAGTTATCGG AACGAACACA AACTTCTCAG GCAATGTTTT TGCTTGGTCA
GAAGTGAATG TGCGGACTGG TGCTAACGTC ACAGGCCGAT TATTTGCCGT TACCGATCAG
GTCACTCTGG ATGCTAACGC AGTAACCAAA GCTAACTAG
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| Protein sequence | MNHSIKKTYL VFTMLLGFIL LAGCNGDNNN DNSNNDNNGV LLTSIAVTPA TPSMPLGLKQ
QFTAMGTYSD GTSSDITNSA TWSSDDSTVA TINGSGLAMG VIPGSVAITA SLIDSSSNEQ
SATTTLTITD ATLTALAITP VNPSLAKGLT KQFMATGTYS DGTSPDVTTS VTWSSANTLV
ATVNASGLAS GVAIGSSIIT ASLGSDETTT ELNITDAILS SIALTPVEPS IAKGITQQFT
AIGTYSDGIS VDITASSNWS SADTLVATMN TSGAAKGVSI GSSIITADFQ AQSATSLLTV
TDASLTSIML TPANPHIPKG NTLQLTATGI YSDGISVDIT SSAIWSSADT LIATVNADGV
VSGITSGSAI ITATSAALSA TTTVTVTDTT LTSIAVTPGN QTIVKGSNKQ LTATGTYSDG
SLANITASVT WSSADTLVAT VNNSGLASGI ETGSSLISAS SGALSGSTNL TITGAALNSI
VVSPTNLSLV KGMNKQFAAT ATYSDGSVAD ISTSVTWSSA DTLVATIDVN GLANGKAAGS
SLITATSGAQ SNSTNLTVTD ATLNSIDVTP INPSIIKNSS QNFVATGHYS DGSTTNITST
VMWSSADTLV ATLNPNEQLN SGRATAIEVG SSVIQASLSG VFADTTLNVT AALPNNPLAP
ELGEVARFAM LASQAITTTS GSAIVDGDLG ILDQARSYYA GFTPGVNAGE FDELTNGLSY
AGDDSTPPYV VPVPYASMVA FINQSRTDLG IAYNFLAADP NPNAATQVCP IELGNLTLTR
GVYKTAADVT LQTGTLTLDG EGDPDSVFIF TIGGNLTSGA PGGDIVLING AQAKNIYWRT
AGKTVIGTNT NFSGNVFAWS EVNVRTGANV TGRLFAVTDQ VTLDANAVTK AN
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