Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1012 |
Symbol | |
ID | 4277127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1184987 |
End bp | 1186339 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638133780 |
Product | nucleoside recognition domain-containing protein |
Protein accession | YP_749703 |
Protein GI | 114562190 |
COG category | [S] Function unknown |
COG ID | [COG3314] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACACATA AAAAACATAG CATTAAAACA ATTCTCACCT TTATTATTCC GTCACTGATT GGCTTGCTAC TGTTTATGAC GCCTATCAAT GTCGAAGGTT CGATTACCAT TCCGATTGCA ATCATCTCAA AAGCATTGCA AAGCCAAATG GGCAGTTCGA TTCAGCTTAT TATGACCTGC ATAGTGGTAC TAATGGCATT GGCCTCATTA CTCACTCAAC TCATTAATCC TAAATTCGTT CGTAAAAGTA TTTTTTTACG CACACTGCTG AAAGTAAATT TATTTTGGTT AGCGGTGCGA ATTCTAGGCG CAATCTTTAT CGTCATGGTT TATTGGCAAG TGGGACCCGA AGCGATTATT TCATCTGCAA CCGGTGGCTT GGTTCTGAAT GATTTAGTAC CAGTACTATT TTCAGTATTT ATTTTTGCTG GCATGTTATT ACCGTTATTG CTCAATTTTG GTTTATTAGA ATTTTTTGGC ACGTTATTAA CCAAAGTTAT GCGTCCAATA TTCAATTTAC CTGGTCGCAG TGCTATTGAC TGTATGGCAT CTTGGTTAGG TGATGGTAGT GTGGGCATTT TAATGACCAC CAAACAATAC GAAACTCGTT TCTATACTGC ACGTGAAGCT GCTGTTATTG GCACAACCTT TTCTGCCGTG TCAATAACCT TTAGCTTAGT GGTGATATCA CAAGTCAAAC TTGAGCACTT ATTTGTGCCA TTTTATCTGA CTGTGTGTTT AGCAGGGTTT ATTGCCGCAA TCATAGTACC TAAACTACCG CCATTATCAT GGAAGAAAGA TCTGTATATC GATGATACTC CTCGCCATGA AGATGACGAA ACAATCCCAG CCAGTCATGG CGTATTTTCG TGGGGATTTG AACAAGCAAT GCAACGGGCA TCTTCTGCTG GTGGCATTAA GCATGTGCTA ACTGAAGGAA TTAAAAACGT TGTCGATATG ATATTCGGGG TGATCCCTGT TGTTATGGCT ATTGGTACCG TCGCATTAGT GTTGGCTGAA CATACGCCTA TTTTTAATTA CTTAGGTATG CCATTTATTC CGCTATTAGA ACTGCTGCAT ATTCCAGAAG CTACCGAAGC CTCGAAAACG ATTGTGGTGG GATTTGCCGA TATGTTTATT CCATCGATTT TGGCCAGCTC TATAGAATCT GATTTGACCC GCTTTGTTAT TGCGGCATTA TCAGTTACTC AGCTTATTTA TATGAGTGAA GTAGGTGCTC TTTTAATTGG TAGTAAAATC CCGGTTAACT TTTTTGAGCT ATTCGTTATC TTCATTCTAC GAACCTTAGT GACACTGCCT ATAATTGCAT TAATGGGTCA TTTACTCATT TAG
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Protein sequence | MTHKKHSIKT ILTFIIPSLI GLLLFMTPIN VEGSITIPIA IISKALQSQM GSSIQLIMTC IVVLMALASL LTQLINPKFV RKSIFLRTLL KVNLFWLAVR ILGAIFIVMV YWQVGPEAII SSATGGLVLN DLVPVLFSVF IFAGMLLPLL LNFGLLEFFG TLLTKVMRPI FNLPGRSAID CMASWLGDGS VGILMTTKQY ETRFYTAREA AVIGTTFSAV SITFSLVVIS QVKLEHLFVP FYLTVCLAGF IAAIIVPKLP PLSWKKDLYI DDTPRHEDDE TIPASHGVFS WGFEQAMQRA SSAGGIKHVL TEGIKNVVDM IFGVIPVVMA IGTVALVLAE HTPIFNYLGM PFIPLLELLH IPEATEASKT IVVGFADMFI PSILASSIES DLTRFVIAAL SVTQLIYMSE VGALLIGSKI PVNFFELFVI FILRTLVTLP IIALMGHLLI
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