| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0975 |
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| Symbol | |
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| ID | 4278192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1137713 |
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| End bp | 1138858 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133741 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_749666 |
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| Protein GI | 114562153 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00141878 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACACAGT CTGCCTTACT CGTACTCGAA GATGGATCAG TATTCTCTGG CACCGCAATT
GGTGCTGCCG GTATCTCTGT TGGTGAAGTG GTATTTAATA CTTCAATGAC AGGTTATCAA
GAGATCCTTA CAGATCCTTC ATATTCACGC CAAATAGTAA CATTAACCTA TCCTCACATC
GGTAACACAG GTACTAATGA TGAAGACACA GAATCGGATT CGGTTCATGC ATGTGGCTTA
ATTATTCGTG ACTTACCGCT TATGGCGAGT AATTTCCGCA ACCAACAATC ATTAAGCGCT
TATTTAAAAG CGAATAATGT GGTTGGCATT GCTGATATTG ATACCCGCAA ACTAACTCGA
ATTTTGCGTG AAAAAGGCGC CCAAGCCGGT TGTATTATGG TTGGTGACCT AGATGAAGCG
AAGGCTCTGG CAGCGGCGAA AGCGTTTCCA GGTCTAAAAG GCATGGATTT AGCCAAAGAA
GTGACCACCG ATAAAGCTTA TACATGGCGT AACGGTAGCT GGAAATTAGT CGGTGGTTTA
CCGTCTGAAA CACCAGCAGC GGAACTTAAA TATAAAGTTG TCGCGTACGA TTACGGTGTA
AAACGTAATA TTTTACGTAT GTTGGTTGAC CGTGGTTGTG ATGTGACGGT AGTACCAGCA
CAAACATCTG CAGCAGACGT ACTTGCCATG AAGCCTGATG GGGTCTTCCT GTCAAATGGT
CCTGGCGACC CTGAACCATG TGATTATGCT ATTACTGCAA TCCAACAAAT ATTAAAGACT
GATATTCCAG TATTTGGTAT CTGTTTAGGT CACCAGTTAC TTGCATTAGC CTCTGGTGCG
AAAACCTTAA AAATGAAGTT TGGTCATCAT GGTGCAAACC ATCCAGTGAG CAATATTGAA
AAAGGCAACG TGATGATCAC CAGTCAAAAC CACGGTTTTG CTGCAGATGA AACCACATTG
CCAGCTAATA TTAAGGTCAC GCATAAGTCG TTATTTGATG GTTCATTACA AGGTATTCAC
CTAACTGATA AGCCAGCATT TAGCTTCCAA GGTCACCCTG AAGCGAGCCC TGGGCCAACC
GATGCCGCAC CGCTGTTCGA TCATTTCATC GAGCTAATTG AACAATACCG TCAGCACGCC
AAGTAG
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| Protein sequence | MTQSALLVLE DGSVFSGTAI GAAGISVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI
GNTGTNDEDT ESDSVHACGL IIRDLPLMAS NFRNQQSLSA YLKANNVVGI ADIDTRKLTR
ILREKGAQAG CIMVGDLDEA KALAAAKAFP GLKGMDLAKE VTTDKAYTWR NGSWKLVGGL
PSETPAAELK YKVVAYDYGV KRNILRMLVD RGCDVTVVPA QTSAADVLAM KPDGVFLSNG
PGDPEPCDYA ITAIQQILKT DIPVFGICLG HQLLALASGA KTLKMKFGHH GANHPVSNIE
KGNVMITSQN HGFAADETTL PANIKVTHKS LFDGSLQGIH LTDKPAFSFQ GHPEASPGPT
DAAPLFDHFI ELIEQYRQHA K
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