| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0970 |
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| Symbol | |
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| ID | 4277768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1132539 |
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| End bp | 1133669 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133736 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_749661 |
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| Protein GI | 114562148 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0103271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAGC GTGATTATTA CGAAGTTCTC GGTGTTGGAC GTGACACCAG TGAACGCGAA
ATTAAAAAAG CGTACAAACG CTTAGCGATG AAGTTTCACC CAGACCGTAA TCCGGGTGAC
AAAGCCGCAG AAGCTAGCTT TAAAGAAATT AAAGAAGCGT ACGAAATTTT AACCGACAGC
GACAAAAAAG CGGCTTATGA TCAATTTGGT CATGCTGGCG TTGACCCTAA TCGTGGTGGA
CACGGTGGTG GCCAAGGTGA TTTTGGCGAT ATCTTTGGTG ATGTATTCGG TGATATTTTT
GGTGGTGGTC GCCGTGGTGG TGGTCAACGC CAAGCTGCGC GCGGTAGTGA TTTACGATAC
AACCTTGAAT TGTCTTTAGA AGAAGCCGTA CGCGGGTTAA CCAAAGAACT GCGAATTCCT
ACTTTAGCAG CGTGTGATTT GTGTGACGGT AGCGGCGCTA AAAAAGGCAC ATCTGCAACC
ACATGTGGTA CGTGTCATGG CCAAGGCCAA GTGCAAATGC GTCAAGGTTT CTTTGCTGTT
CAGCAAGCGT GTCCTACTTG TCATGGTCGC GGTAAAATCA TTAAAGATCC TTGCGGCAAG
TGTCATGGCG AAGGTCGGGT TGAGAAAAGC AAAACCTTAT CAGTTAAAAT TCCTGCTGGT
GTAGATACAG GCGATCGTAT CCGTCTTACT GGCGAAGGTG AAGCGGGCGA GTTTGGTGCT
CCACCAGGTG ATTTATACGT TCAAGTTAGT GTGCGTGAAC ACGCTATCTT TACTCGTGAT
GCCAATAACC TTTACTGTGA AGTACCTATT TCATTCAGTA AAGCAGCATT AGGCGGCGAG
ATTGAAGTAC CGACATTAGA CGGTAAAGTT AGCCTTAAAA TCCCAACAGA AACCCAAACT
GGGCGCATGT TCCGCCTACG AGGCAAAGGG GTTAAGTCGG TCCGTAGCCA TGCAGTAGGT
GACTTACTGT GTAAAGTGGT GATGGAAACA CCGGTTAACT TGAATGAAAA ACAAAAAGAG
TTATTGCGTG AGTTTGAAGC AACATTAACT GGCGAATCAA AAAAACACAG CCCTAAAGCT
GAAGGTTTCT TTGATGGCGT TAAAAAGTTC TTTCAGGATT TAAACAGTTA A
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| Protein sequence | MSKRDYYEVL GVGRDTSERE IKKAYKRLAM KFHPDRNPGD KAAEASFKEI KEAYEILTDS
DKKAAYDQFG HAGVDPNRGG HGGGQGDFGD IFGDVFGDIF GGGRRGGGQR QAARGSDLRY
NLELSLEEAV RGLTKELRIP TLAACDLCDG SGAKKGTSAT TCGTCHGQGQ VQMRQGFFAV
QQACPTCHGR GKIIKDPCGK CHGEGRVEKS KTLSVKIPAG VDTGDRIRLT GEGEAGEFGA
PPGDLYVQVS VREHAIFTRD ANNLYCEVPI SFSKAALGGE IEVPTLDGKV SLKIPTETQT
GRMFRLRGKG VKSVRSHAVG DLLCKVVMET PVNLNEKQKE LLREFEATLT GESKKHSPKA
EGFFDGVKKF FQDLNS
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