| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0961 |
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| Symbol | |
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| ID | 4277759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1120087 |
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| End bp | 1121166 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133727 |
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| Product | DNA polymerase IV |
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| Protein accession | YP_749652 |
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| Protein GI | 114562139 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.215034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAA TCATTCACAT CGATATGGAT TGTTATTTTG CCGCGGTAGA AATGCGCGAT
TTTCCTGAGT TGAGAGGAAA ACCCATTGCT GTTGGCGGCA GAAGTGACCG CCGAGGTGTG
ATAAGTACCT GCAGCTATGA GGCCCGCAAA TTTGGGGTGC GTAGCGCTAT GTCCAGTTAT
CATGCGTTGC AGTTGTGTCC GCAATTGATT TTAGTACCAG GGCGGATGGA AGTGTATAAA
TCGGTGTCAC TGCAAATACG TGAGATTTTT CATCGATACA CTGATCTTGT TGAGCCTTTG
TCTTTGGACG AAGCGTATCT TGATGTGACT GATTGCGATG CTCACCAAGG CAGTGCGACA
TTAATTGCCA AGACGATACG AGATGAGATT TTTGAGGTTA CCGGATTAAC TGCTTCAGCT
GGTATAGCAC CCATTAAGTT TTTAGCCAAA ATTGCATCCG ATTTAAATAA GCCGAATGGA
CAATATGTTA TCACTCCAAA TCAAATTGCT GATTTTGTAA AAGACCTACC GCTGAGTAAA
ATTCCTGGAG TTGGTAAAGT CACTTCAAAA AAGTTAGCCG ATATTGGCTT AACCACTTGT
TATGATGTGC AGCAATACCC TAAAGTGCAA TTAATTGAGG CCTTTGGTAA GTTTGGCCAT
GTGTTGGCTG AGCGTGCTCA AGGGATCGAT TCAAGACAAA TTAGCCCGCA TCGAGTGCGT
AAGTCTGTCG GGGTTGAAAC GACATTAGCC AAAGACATTT TTACGTTAGA GCAATGTCAT
CAGGTATTAC CGCAACTGAT TCAAGAGCTG AGTACTCGGG TTCGTCGCAG TGCAAAAGAC
CGACAGATCC ATAAGCAGGT TGTGAAACTG AAATTTAATG ATTTTAAGCA GACCACCATC
GAGCATCGCA GTGATGAGAT TTCGATTAAC CTGTTTCATG AGTTATTGCT GCAAGCATTA
CAACGAAGCC AAGGGCGAGG GATTCGATTA GTCGGTGTGA GCGTTGGCCT AGCGGATGTG
ACGTTGGCTT CTTCCGAGAG TAGTGTCGAT CAAATTACTC AACTCGATTT ACAATTTTAG
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| Protein sequence | MRKIIHIDMD CYFAAVEMRD FPELRGKPIA VGGRSDRRGV ISTCSYEARK FGVRSAMSSY
HALQLCPQLI LVPGRMEVYK SVSLQIREIF HRYTDLVEPL SLDEAYLDVT DCDAHQGSAT
LIAKTIRDEI FEVTGLTASA GIAPIKFLAK IASDLNKPNG QYVITPNQIA DFVKDLPLSK
IPGVGKVTSK KLADIGLTTC YDVQQYPKVQ LIEAFGKFGH VLAERAQGID SRQISPHRVR
KSVGVETTLA KDIFTLEQCH QVLPQLIQEL STRVRRSAKD RQIHKQVVKL KFNDFKQTTI
EHRSDEISIN LFHELLLQAL QRSQGRGIRL VGVSVGLADV TLASSESSVD QITQLDLQF
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