| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0954 |
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| Symbol | |
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| ID | 4277682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1114694 |
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| End bp | 1115941 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133720 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_749645 |
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| Protein GI | 114562132 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000185689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATTC TTGAATCTAC TCCGATAGAT GTCTATCTAG GTGTGAGTAT GTTTACTGTG
ATTGTCTTGG TTTTGGTATT AGTGATTTTA TTCGCTAAAT CAAAATTGGT GGCAAGCGGT
GATATCATTA TTGGTATTAA CGGCGACGCA GATAAAGCAA TTAAAACAGG TGCTGGCGGC
AAGTTACTTG GCGTTTTAGC AGACAACGGC ATCTTCGTAT CAAGTGCGTG TGGTGGCGGT
GGCTCATGTG GTCAGTGTCG TGTACAGATT AAGTCTGGTG GTGGTGATAT TCTACCTACT
GAACTTGACC ACATTAGCAA AGGTGAAGCA CGTCAGGGGT GTCGTTTATC TTGTCAGGTA
AATGTGAAAA CTGACATGGA AATCGAACTT GATGAAGAGA TTTTCGGCAT CAAGAAATGG
GAATGTGAAG TTATCTCTAA CGATAACAAA GCGACGTTCA TTAAAGAACT TAAGCTACAA
ATTCCTGATG GCGAATCTGT GCCTTTCCGT GCCGGTGGTT ATATTCAGAT TGAAGCTCCT
GCTCATCATG TTAAATATGC TGAGTTTGAA GTGCCTGATA AATACCGTGG CGACTGGGAA
CACTTCGGCT TCTTCAAGTT AGAGTCAAAA GTAGACGAAG AAACCATTCG TGCCTACTCA
ATGGCTAACT ACCCAGAAGA GTTCGGGATT ATTATGTTGA ACGTGCGTAT TGCTACGCCA
CCGCCACGTA ATTTAACCCT ACCTTGCGGT AAAATGTCTT CGTACATTTG GAGCTTAAAA
GCCGGTGATA AAGTGACTAT TTCTGGTCCA TTTGGTGAGT TTTTTGCTAA AGACACCGAT
GCAGAAATGG TATTCATTGG TGGTGGTGCT GGTATGGCCC CAATGCGCTC ACACATTTTT
GACCAATTAA AGCGTCTTAA ATCTAAGCGT AAGATGAGCT TCTGGTACGG TGCGCGTTCA
CAACGTGAAA TGTTCTATGT TGAAGATTTT GACGGCTTAG CGGCTGAAAA TGAAAACTTC
AAATGGCATG TCGCGTTATC GGACCCACAA GCTGAAGATA ACTGGACTGG TTATACTGGT
TTCATTCATA ACGTATTGTA TGAAAATTAC TTACGTGACC ATGATGCGCC AGAAGATTGT
GAGTTCTACA TGTGTGGACC TCCAATGATG AACGCCGCCG TTATTGGTAT GCTAAAAGAT
TTAGGTGTTG AAGACGAAAA TATCTTATTA GATGATTTCG GTGGTTAA
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| Protein sequence | MGILESTPID VYLGVSMFTV IVLVLVLVIL FAKSKLVASG DIIIGINGDA DKAIKTGAGG
KLLGVLADNG IFVSSACGGG GSCGQCRVQI KSGGGDILPT ELDHISKGEA RQGCRLSCQV
NVKTDMEIEL DEEIFGIKKW ECEVISNDNK ATFIKELKLQ IPDGESVPFR AGGYIQIEAP
AHHVKYAEFE VPDKYRGDWE HFGFFKLESK VDEETIRAYS MANYPEEFGI IMLNVRIATP
PPRNLTLPCG KMSSYIWSLK AGDKVTISGP FGEFFAKDTD AEMVFIGGGA GMAPMRSHIF
DQLKRLKSKR KMSFWYGARS QREMFYVEDF DGLAAENENF KWHVALSDPQ AEDNWTGYTG
FIHNVLYENY LRDHDAPEDC EFYMCGPPMM NAAVIGMLKD LGVEDENILL DDFGG
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