| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0913 |
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| Symbol | |
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| ID | 4278617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1073125 |
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| End bp | 1075437 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133679 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_749604 |
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| Protein GI | 114562091 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.546873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATT ATAATAGAAC ATTACTTGCT GCAGCGTTTA TTGCAGCGTT GGGTGTAACA
GGTTGTGGCT CTGACGGCAG TGATGGTGCC GCAGGAGAAC CGGGTACTCC GGGCACACCT
GGAACGCCTG GTACACCTGG TACTCCAGCT GGTTCGGTCG TTACAACAGT TGACAATGCC
TATGACTTTA ACTTAACACT GGCTCCTACA GATATTGTTG TAGTAGGTGC AGATCCATTT
AGCCTTAAAT TTACCGTAAC AGGTAAAGGT ACTGGTGGAG TGGACGTTCC ATACTCGGGA
CTTGATAAAG TCGCGTTATA TGTAATGAGT CAATCAGCTA ATGCAACTGA CACTGGCGCG
CCAATGTTAT GGACAAACCA TGCACTTGCC AATGATTTTG GTAGCAGCAT GTATTGTACT
TTAACGGGTA CAGCCGCTGC TCGAGGAGGC GCTGTAGTCG ATGCTTGTAC ATTAGTTGAA
GATGAAGCTA ATCCTGGTAC TTATACTGGT ACTTGGGCAC ACGACGGTAA CGCGCCTGTA
GTATTGGCTA GTGGTGATGC AAACGATTTA GCTCGTGTGT TTATTCGTGC TTATGACGTT
GTGATGGCTG ATGGCACTTC AGTGAGCGAT AAGATTTTAT CAACTCCGGT TGATTTTATT
CCTGCTACTG GCGAGCTTGC TGTTTCTGCA AAAGACTCAG TGTCTAATGC TGCATGTATT
AAATGTCATA GCCCAATGGA AGGTTACGCT GATACTGATA TGCGTATTGC CAATATTGGT
GCTCATCATA ATTACCAAAA AGTTGAAAAT TGCGTAGCTT GTCATAATCC AGCTTATGCC
GGTGGACAGG ACGATCCTGA AAAAGGCTTC AATGCAAACT TCAATGCCAT GATCCACACT
ATCCACGCGG GTCATCATAT TGCTGACTCT CTAACTGGTG AAGCCAAAGA GATGTTTGGT
GAAATTGGTT TCCCATCTGA GCTAAATGAA TGTACCGCTT GTCATGATAA TGGCCAGCAG
TGGAATGAAA ACATTTATGC TGAAGCGTGT GTGTCTTGTC ACGTTGATGT TGATTTAGCA
ACTGGTGTAA ACCATAGAGG TATTGTGCCT GCTAGTGACG CTGTATGTTC TGGTTGTCAC
GGTTCAGGTA GCTTAAGCCC AAGTGAAGCA CATAATGTTG GCGTGCGTGC AATGGCGACT
GACTCTATTG TGTTTGCAGT TAGCAATGTC ACTTATGCAG AAGATGCTGT AGATGTCAGC
GGTGTTATGC AAGATCAAAT GAGCATTACT TTTGATGTAA GCATTGATGG TCAACCTATT
GCTGATGGCT TCGATTTTGG TCCTTATGCT AATTATGACG AAATCAAAAC TGGTACTGTT
GATGCAGATG GCACTTACTT TGTGGGTACA TCTTTAAATC TAACAGGTGT TGTTTCTGCT
GGTGGTAAGC TTGTTGTTAC TAAAGTAGCT AACTTTAACG TCGTTGGTCA GAGTATTGCC
ATTACTCCTC GCTTCTCAGT TTGTGCTGAT GAGAAAGCGA AGTTAATTAA ATGTGTTAAT
ACAGTTGGCG AAGATCAATA CGCGGTTGAG TATATTGCAG TAACTATGGA CACTGCATAT
TGGAACCTAG TTAATGCAGA CGGTTCAGGT GCCAATATTG CTCGTCAAAG CGTACCATCT
ATGGTTAGCG CAGACGAAGC AAAATGTAGT ACTTGTCATA CATCGTTAGG TATTGCAAAG
CACTACGGTA ACGAGCGTTT TGACCAATGT ATGGGTTGTC ACAACAATAC ATGGGGTGGT
TCATACCATG GCACTGTTGA GTACAAAACT GATGCAGTTG ATGCTGATGG CGTACCAGTC
TTTGCTATTG TTGAAGGTCT AACTTACAGC AACCGTGACT TAATGACTGT TTCACATCGC
TTCCACAGCG GCTTATGGGA TGACAACCGT GGTTTCCCTG CAATTCATTT GAATTCAGAT
ATGGAAACTG AAGGTTACCC TGCAGTTGCA ACTCAATGTT CAGCATGTCA CAAAGAAGAT
GTCGGTATCT TTGCTGCTGA TGGTGGTTTA ACGTCAGGTA AACGTTCAAT TGCAGTGGAT
GCAGCAGGAA CTAAATTTGT GTCTCCAGTT GCTGAGTCTT GCCGCTCTTG TCATACAAAA
GCTTCTGCTC TGACTCACTT TGAGAACAAT GGTGCTTATG TCGAAGGTAG TCCAGCATCA
ATTGCTAATC TACCTGTTGA ATCATGTGCA ACATGTCACG CTGAAGGTAA AGCTTACGGT
GTTGATAAAG TTCACTCTGG TGCAGCGCAC TAA
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| Protein sequence | MKNYNRTLLA AAFIAALGVT GCGSDGSDGA AGEPGTPGTP GTPGTPGTPA GSVVTTVDNA
YDFNLTLAPT DIVVVGADPF SLKFTVTGKG TGGVDVPYSG LDKVALYVMS QSANATDTGA
PMLWTNHALA NDFGSSMYCT LTGTAAARGG AVVDACTLVE DEANPGTYTG TWAHDGNAPV
VLASGDANDL ARVFIRAYDV VMADGTSVSD KILSTPVDFI PATGELAVSA KDSVSNAACI
KCHSPMEGYA DTDMRIANIG AHHNYQKVEN CVACHNPAYA GGQDDPEKGF NANFNAMIHT
IHAGHHIADS LTGEAKEMFG EIGFPSELNE CTACHDNGQQ WNENIYAEAC VSCHVDVDLA
TGVNHRGIVP ASDAVCSGCH GSGSLSPSEA HNVGVRAMAT DSIVFAVSNV TYAEDAVDVS
GVMQDQMSIT FDVSIDGQPI ADGFDFGPYA NYDEIKTGTV DADGTYFVGT SLNLTGVVSA
GGKLVVTKVA NFNVVGQSIA ITPRFSVCAD EKAKLIKCVN TVGEDQYAVE YIAVTMDTAY
WNLVNADGSG ANIARQSVPS MVSADEAKCS TCHTSLGIAK HYGNERFDQC MGCHNNTWGG
SYHGTVEYKT DAVDADGVPV FAIVEGLTYS NRDLMTVSHR FHSGLWDDNR GFPAIHLNSD
METEGYPAVA TQCSACHKED VGIFAADGGL TSGKRSIAVD AAGTKFVSPV AESCRSCHTK
ASALTHFENN GAYVEGSPAS IANLPVESCA TCHAEGKAYG VDKVHSGAAH
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