| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0912 |
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| Symbol | |
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| ID | 4278616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1071831 |
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| End bp | 1072787 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638133678 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749603 |
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| Protein GI | 114562090 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000235744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATATTC AAGCATTGAA AAAAGTCAGC GAATTAGATG TATTTAGTTT GTTGGTGTTT
AAGCTCATAT ACGAGACCGG TTTTGCTAAT TTTGCAGCCA AAGAGCTTGC TGTATCCGCG
CCTAAAATTA GTCGATGTTT AACATCATTA AGGGCTATTT TTAACGATGA GTTGTTTTTC
CGTCGCCAAC AAGGGCTAAA ACCAACTCCA TTAGCTGAAC GTTTGTATCA GCCTGTTTGC
CAGTTATGTG ACATGGTGAG CCAAATTGAA CGAGTGGCAG ATGATCGTTT AAATCATCAT
CAAACACCTA TTTTACATAT TGCGGTATCG CCAAGCATTA TTACCAGTGT GGCCATTGCG
TTAAGTAAGC TTCCGCGTGA TGTTATCGGT AAAGTTAAAC TTCACAGTTG GCAAGCCGAC
ACTGAAGAGC TGATTTATAA TGGCGAGCTC GATTTTGGCA TTGGTTTTGA AACTCAGGAC
ACTCATGGTC TAGAGGCTTA TCCTATTGCT AATGTGACAT CATTATGTGT GGTGGGTAAT
ACCAATCATC TATTTTGGGC CGGTGCCGAA CAGATAAAGT TAGAAGATAT TATTCAACAC
CCTATCGTGT ATTTACGCTG TAAAGGCTTT AACAATCGTA TTGATCCATT AGAGTTATAT
TGTCAAACTC ACGGTTTACT ACTAGAAGAT ATTGAATGTG CAAGAAAGCT CGAAGATTGG
TATTGGCACA TACTGACCAT GGACAGTTTA GCCATTACTA TTTGTAATGA AGGTTCGTTC
GCACAACAAA TTCCGCAATT AAGAGTAGAA CGACTTCCAC AGAGTGAATT TACTAAGCTT
AATAGCGTCA TGGCGATGCC AAGTTATTGT TTAATTGAGC GAGCAGAACA CTACCGCCGT
TATTCGCTAA ATGTGAAGGA AATGATAATC GATATCATTA AATCATTGCT GGTGTGA
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| Protein sequence | MDIQALKKVS ELDVFSLLVF KLIYETGFAN FAAKELAVSA PKISRCLTSL RAIFNDELFF
RRQQGLKPTP LAERLYQPVC QLCDMVSQIE RVADDRLNHH QTPILHIAVS PSIITSVAIA
LSKLPRDVIG KVKLHSWQAD TEELIYNGEL DFGIGFETQD THGLEAYPIA NVTSLCVVGN
TNHLFWAGAE QIKLEDIIQH PIVYLRCKGF NNRIDPLELY CQTHGLLLED IECARKLEDW
YWHILTMDSL AITICNEGSF AQQIPQLRVE RLPQSEFTKL NSVMAMPSYC LIERAEHYRR
YSLNVKEMII DIIKSLLV
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