Gene Sfri_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0861 
Symbol 
ID4278689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1011558 
End bp1013186 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content39% 
IMG OID638133627 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_749552 
Protein GI114562039 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATT TTAAAATTAA ACAAAAAATG CTCATTAGCT CGTTAATTCC ATTAGCTATT 
CTCATCATAA TTTGTGGCAT TGCGGTGAAT ATGATGGGGA AAATCGAAGA TGGAGTGATG
AGGATCTATT CTGATCGCGT TGTACCGTTA GAAGATTTAA AAATCATTGG TGATGACTAT
GCTGTCTTAG TCATTGATGC AATAAACAAA GCCAATGCTG GTGGCTCAAC CGCTCAAGAT
GCTGCTGAGA CATTAATGAG TGCAAAAAGT AATATTGATA CACTGTGGAA AAAATATTTA
GCCACTAAGT TAACCCCAAA AGAAAGCCAA CTTAGTATTG AAGCCAATGA TATGTTTGGC
CCCGCAGATG AGCAAATTGA TTTTCTTATC AGTAAACTGC AAAACATGTC TGGAAAAATC
CCAGGTCAAT TGACCGATGA CATTATGCCT TTATACGGGG TAATCGATCC TATTAGCGGT
AAAATTGCCG AATTAGTGTC ATTGCAAATA AAAGTAGCAG GCGATGAATG GCGATTAACT
CAAGAGATAT ATCAATCATC AGTTCAGTTA TTTATTTTCT TTACGTTTTG TGCTGTGGTT
ATCAGTGTAG TGTTAACCAT TTGGGTACTG CGTAGTGTGA TGAGGCCAGT GACAGATATT
TTGATGAAAC TAAAGCTCAT TAAGCAAAAC TCAGATTTAA CCCAAGTGTT TACTCCTTAT
AATGATGATG AATTAGGCAT GATTTCAACG AGCCTTACAG GCGTTATAAC TCATCTAAGA
GGCATTATTG AATCAATTTC AGATGCCGCA AATACTATCA ATATTTCATC AGAAGAGTTG
CAGCGTTTCA CTGAAGAAAC CAACCATAGA ATGATACAGC AGCAAGATGA GTCAGAACAA
ACCGCAACGG CTATGAATGA AATGACAGCG ACAGTGGCAG AGGTTGTTCA AAGTACCAAC
TTTGCCGCTG AACAGGCGAA ACAAGCTAAT AATCATGCTG AAAATGGTAA TGTTATTGTT
CAAAATTCAA TAGACAGTAT GTCGCAATTA TCTAACCAAA TTGGCACCAC GGCGGAGGTG
ATATCTCATC TTGCTAAAGA GAGCCAAAAC ATTGGCCAAG TGTTAAGTGT CATTAAAGGC
GTTGCCGAGC AGACTAACCT TTTAGCCTTG AACGCCGCCA TTGAAGCCGC AAGAGCGGGT
GAACAGGGGC GAGGATTTGC TGTTGTTGCA GACGAAGTAC GTACTTTAGC TAAACGTACT
CAAGACTCAA CACTGCAGAT TGAAACCATG ATTGACGGAT TACAAAAAAG TGTCGTACTT
GCGGTTTCTT CAATGGATGA AGGCTTAGCC TTAGTGCATA GTGCCAATGA TAAAACCAAC
AGTGCTGGCA CCGTTCTCAA TGAAATTGTC ACTTCGGTCG ACAGTATCAA TGAACTTAAC
ACTCAAATAG CTACAGCAGC AGAAGAGCAA TCCTATGTAG CTGAGAGTAT CAATAAAAGT
ATCATCACCA TAAATGATAT TACTCAAGCC TCATCCGCAG CGACCGAAAA ACTCACCCAT
TCTGTTAACG ATTTACAATC ACTGGCTAGC TCAATGCAAC TTCAAGTGGC GACATTTAAA
ATAGCCTAA
 
Protein sequence
MLNFKIKQKM LISSLIPLAI LIIICGIAVN MMGKIEDGVM RIYSDRVVPL EDLKIIGDDY 
AVLVIDAINK ANAGGSTAQD AAETLMSAKS NIDTLWKKYL ATKLTPKESQ LSIEANDMFG
PADEQIDFLI SKLQNMSGKI PGQLTDDIMP LYGVIDPISG KIAELVSLQI KVAGDEWRLT
QEIYQSSVQL FIFFTFCAVV ISVVLTIWVL RSVMRPVTDI LMKLKLIKQN SDLTQVFTPY
NDDELGMIST SLTGVITHLR GIIESISDAA NTINISSEEL QRFTEETNHR MIQQQDESEQ
TATAMNEMTA TVAEVVQSTN FAAEQAKQAN NHAENGNVIV QNSIDSMSQL SNQIGTTAEV
ISHLAKESQN IGQVLSVIKG VAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAKRT
QDSTLQIETM IDGLQKSVVL AVSSMDEGLA LVHSANDKTN SAGTVLNEIV TSVDSINELN
TQIATAAEEQ SYVAESINKS IITINDITQA SSAATEKLTH SVNDLQSLAS SMQLQVATFK
IA