Gene Sfri_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0853 
Symbol 
ID4278681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1001641 
End bp1002258 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content40% 
IMG OID638133619 
Productnegative transcriptional regulator 
Protein accessionYP_749544 
Protein GI114562031 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGTAC CTGATAAGTG GGATATGGGG TCTAGGGAGT TAATCCATCA GTTTATCAAC 
CAATATGGTT TTGCGACTGT TGTGTCTAAC GATTTAGAGG GCTCGCACTT ACCTTTATTA 
CTCATTGCCT CAGAGGGCGA AAATGGTACC TTGTATGGCC ATTTTGCTCG TAGTAATCCG 
CATTGGAAAC ACATAGAAAA CACAAAAGTG CTGTGTATTT TCAATGGCCC ACATTCTTAT 
ATCTCACCCA CCTGGTATGA CTCCCATCCA GCTGTTCCGA CTTGGAATTA CAGCGTAGTA 
CATGCAAAAG GCATTATTGA ATTAATTGAT GATGCGACCA CCGCCCAAGT ACTTGAATCT 
ACCATTCAAC AATACGAACC TTCATTGCTA GAAGGTAATG GCTTTATTCC CGATGGTTAT 
CAACAAAAAT TAGCCAAGGG TATTGTTGGC TTTAAGATTG TCATTGATGA ATTACAAGGA 
AAGCAAAAGT TAGGGCAGCA CCGTAACCAA AGTGATCAAC AAGGTGTGGC GCAAGGATTA 
TCACTGTCAA ATAGGGTTGA TGAAAAACAG CTATTAGCTT ATATGATGAA GAATAACATA 
GGATTAGGTA ATAAATAG
 
Protein sequence
MHVPDKWDMG SRELIHQFIN QYGFATVVSN DLEGSHLPLL LIASEGENGT LYGHFARSNP 
HWKHIENTKV LCIFNGPHSY ISPTWYDSHP AVPTWNYSVV HAKGIIELID DATTAQVLES 
TIQQYEPSLL EGNGFIPDGY QQKLAKGIVG FKIVIDELQG KQKLGQHRNQ SDQQGVAQGL 
SLSNRVDEKQ LLAYMMKNNI GLGNK