| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0824 |
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| Symbol | |
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| ID | 4278777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 969911 |
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| End bp | 971890 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133592 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_749517 |
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| Protein GI | 114562004 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTACTA AACCAACAAA AATCGCACTG TTATTAAGTG CTGTCTTCAG TGTCGCAAGT
GTTAATGCTG TTGCGATTGA ATCAGTTGTT ACATCCCCCT CGTCTTCGGC TATCAGCATG
GATGAAACCA TTGTGGTTAT TGGCCGTAAT GCTGCCAAGC CATTAAATAT TGCAGCCAAT
GTTAATGTCA TTGATGCTGC TGATATTCAA ATGAGCGGCG CCACCAATTT AACCGATTTA
TTACGTGGAC AATCTGGTAT TCAGGTGTCG GATAATAACT CGGGCACTGT ATTTTCTATG
CGTGGTTTTT CTGCATCACA AGCCGCTAAT AACACCTTAA TTTTGGTCGA TGGACGCAGA
CTGAATAATA TCGATATTTC AGCGCCGAGT ATTGAATCGA TCCCGATTAA CTTAGTTGAG
CGTATTGAGA TTTTATCGGG TAGCGCAGGG GTTTTATATG GTGACCAAGC CGTTGGCGGC
GTTATCAATA TCATTACCAA AGCACCAACA GAAACTGGTG GTGGCTTACA GGTTAGTGGT
GGCAGTTTTG ATACCTATGA AGCTAAAGGT GATATTTCAG GGGCTATCAA CGATGCATGG
CGTTACTTTT TAGCGGCGAG CTATAACGAA AGCGATAATT ACCGCGATAA TAATGACAAT
GAAACCAGCT CTATTCTAGG TCGCTTGCAA TATCAAACAG ATATCGAAGA CTTCTTTGTT
GAAGTGAATC ATTTTGATAA CGATCGCCAA GCACCGGGTG CGCTAACGCT GGCGCAATAT
GAAGCCGATC CTCGCCAAGT AGCATCATTT TCTGAAGGTG AGTTCTCTCA TGAAATAACC
ACAGCATTGC GCAGTGGTTA TCAATATCAG CTGAATAAAA TCTGGGCCTT AGGTGCTGAT
TTAACCTACT CAGATACATC AACCTCGAGC TTGTTATTTG GTGGCGCAGG GCGTATTGAG
CGCGATCTAT TGAGTTTCTC GCCTAAAGCT ACTGCTAACT ATCATTTAGA ACATGGCGAT
TTAAATTTTG TTGCCGGTAT TGATGTGAGT AAAGGTGAAG CAGATTTCGA TACGCTCTAT
ACGCAACGAA ATAATGAACA GACACAAAAG AGCGCCTATG TGCAAGCATC GGTACCGATC
ACGCCGACTT TATCTTATGT CGTCGGTGGT CGTTATTCTG AAGTGACAGA CGATTTATAT
GACCAATTAC TTTATCCGAA TCGTATTGAA ATCGATAATG ACGCCCATGC GTTGGAGTTG
GGGTTAAATT ATCGCCCAAG CAGTGAAAAT CGTTTTTATA TCCGTGCAAA TGATAACTTC
CGTTTTGCTA AAGTCGATGA GCAAGCTTAC ACCCCGCTTG ATGTACAAGG TTTGAATCCA
CAAACAGGTC GTTCTTACGA AGCGGGCTGG GACTTTACCA CTACGACTCA GACATTAAAA
ATCAATGCTT ATCAACTTGA GTTAGAAGAT GAGATTGTTT ACGAAGGCGG TCGTACTGAT
GGGCCTTATG GTGGTGGTGC TAACGTAAAC GCCGATGAAT CTCGCCGTTT TGGTGTAAGC
ACTGCTTATG ATGTACAGTT ATCTAATGAC TGGCTGCTAG GAGCTTCGTA CGACTATATT
GATGCTGAGT TCACTCAAGG TGAAAATGAC GGTAAAGCGT TATCATGGGT AGCAAAACAT
TCAGGTAAAG CCTTCGTAAG CTATGATTTT GCTGATAATT GGCAAGCTTT TGTTGAAGGT
GTTTACACTG GTGAGCGTTA CATGGAAGGC GACAACAGCA ATACCGGTGA TAAGTTAGAC
AGTTACGTGC TAACAAACCT TGCGCTTAAC TATACCTATT CAGGTTGGAA TGGTAGCTTA
CGTGTAGATA ACTTGCTTGA TGAAGATTAT GTTGGCACCG GTTATTACTC GGCTTATGGC
AGTGGTTATT ATTCTGGTAC TGGTCGCTCA ATTAGACTTA CCGCGGGTTA TCGTTTCTAG
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| Protein sequence | MGTKPTKIAL LLSAVFSVAS VNAVAIESVV TSPSSSAISM DETIVVIGRN AAKPLNIAAN
VNVIDAADIQ MSGATNLTDL LRGQSGIQVS DNNSGTVFSM RGFSASQAAN NTLILVDGRR
LNNIDISAPS IESIPINLVE RIEILSGSAG VLYGDQAVGG VINIITKAPT ETGGGLQVSG
GSFDTYEAKG DISGAINDAW RYFLAASYNE SDNYRDNNDN ETSSILGRLQ YQTDIEDFFV
EVNHFDNDRQ APGALTLAQY EADPRQVASF SEGEFSHEIT TALRSGYQYQ LNKIWALGAD
LTYSDTSTSS LLFGGAGRIE RDLLSFSPKA TANYHLEHGD LNFVAGIDVS KGEADFDTLY
TQRNNEQTQK SAYVQASVPI TPTLSYVVGG RYSEVTDDLY DQLLYPNRIE IDNDAHALEL
GLNYRPSSEN RFYIRANDNF RFAKVDEQAY TPLDVQGLNP QTGRSYEAGW DFTTTTQTLK
INAYQLELED EIVYEGGRTD GPYGGGANVN ADESRRFGVS TAYDVQLSND WLLGASYDYI
DAEFTQGEND GKALSWVAKH SGKAFVSYDF ADNWQAFVEG VYTGERYMEG DNSNTGDKLD
SYVLTNLALN YTYSGWNGSL RVDNLLDEDY VGTGYYSAYG SGYYSGTGRS IRLTAGYRF
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