| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0813 |
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| Symbol | |
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| ID | 4277909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 958120 |
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| End bp | 958641 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133581 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_749506 |
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| Protein GI | 114561993 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA TTTTACTGAT CCATTCAAGT GTCCATGGTT ACACTCAAAA AATATGTGAA
TATTTACAGC GTCAACTGAT TGAGCAAGAT CAACTGGTCA CGGTAGCATC CTTAGCGGAA
GCTCCCGATT TAGCCCTATT TGATAAAGTG TACATTGGCG CCAGCATTCG TCATGGCAAA
CATCGCCCAG CCCTGTATCA ATTTATTGAA GATCATCGTG CGGAATTGGA CAATAAACCC
AGTGGTTTTT TCTCGGTGAG TTTAGTGGCG CGCAAACCCA ATAAGAATAC GCCGCAAACT
AACAGCTATA TGCAACAGTT TTTAAGTCAA AGCCCTTGGC AGCCCAAGTT ATTACAGGTG
TTTGGCGGTA ATTTAGATTA CCAAGGTTAT GGTGCCATGG ACCGGAATAT TATTCGGTTT
ATTATGTGGC TAACCAAAGG ACCGACAGAC CCTAATACCA AAGTAGAGTT TACCGATTGG
CAGAAAGTTG ATGAGTTTGC TCAGCAAATA ATAGAGGCTT AA
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| Protein sequence | MSQILLIHSS VHGYTQKICE YLQRQLIEQD QLVTVASLAE APDLALFDKV YIGASIRHGK
HRPALYQFIE DHRAELDNKP SGFFSVSLVA RKPNKNTPQT NSYMQQFLSQ SPWQPKLLQV
FGGNLDYQGY GAMDRNIIRF IMWLTKGPTD PNTKVEFTDW QKVDEFAQQI IEA
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