Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0810 |
Symbol | |
ID | 4277906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 953546 |
End bp | 954949 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133578 |
Product | hypothetical protein |
Protein accession | YP_749503 |
Protein GI | 114561990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.682214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAA AGTTAACCTT GTTGGCAGTA TCTGTGGCAA GTGTATTGGG TTTGAGCGTA ATACCTAATG CTCAAGCTGC AACGAATACT GAAACATTAG CCAAAGCCAT TGCCAAGCAA GAAGCTGAAA TTACGATATT AAAACAGCAG CTTGCCACAT TGGCCGCCGA GCAAAAACAA CAACAGCAGC AAAACAAACA AGTGACGACT CAAGTTGACA CTGTGGTGCA ACAAACCACT AAAGCGCAAG ACCGTTTAAG CCGTTTTAGC TTTAACTCAT ATGGCAGCGC TGTTTACACC AGTGATGAAT ATTTCGATAA CGTACAAGAT ACATCCGCAG AGCGACGTAG TCGTACTGAT TTAGAGCGGA TTGTGACCGA GTTTGGTTAT CAGTTCACTG ATGATTGGAG TATGGAAGTT GAAATTGAGT ATGAGCACGG TGGCACTGGC ACCTCACTAG AATATGACGG CTTTGATGAA TTTGGTGAGT TTGAATCCGA AGTTGAAGCG GGTGGCGAAG TGGTGGTTGA AAAAGCGGAA ATTCGTTACC GTCCATCAAA AGCCTTTGGG GTGAAATTCG GTAATATTCA CTTGCCTATT GGCTTGTCGA GCATGTTACA CAAACCTAAT CAATATCTAA CAGTGCAACG TCACAAGAGT GAAGCTGCGA TGATGCCGAC CGTTTGGAAC GAAAACGGTA TTGGTGTTTA CGGAGAGATT GCCGATTTTC ATTATCAGGC ACAAGTTGTT AGTGGGTTAA ACTCTGAGTA TTTCCGCACT TATGATTGGG TGGCATCAGG CCATCAAAAA CGCTTTGAAG AAGTGAATGC TGACGACCTA GCATTTGCTG GTCGTATTGA TTATGGCAAT TTCAAAACCG GCAGTGCAGT CGGCGTGGCT TATTACTACG GTAATACCAG TGGTAATCGC CATAAGAGTA ACAAACTCGA TGTTGATGGT GCTCTTAGCA TTGTGTCTGT TGCCGGAGCC TTTGTTGAAG GTCCATGGAT CCTCCGCGGT CAATATTTAT ATGGCTCGTT AGACAATGCT GACGCTATTA CCCAGGCTAA CAAAACCACC CCAGGTTTAC GTCCAGGTAA TTTTGCCCAA CTGGGTTCAG AGTCGCAGTC GTTCTTTGTC GAGGCGGGCG TCAAACTTGA TGAATGGTTT GATATTCCGA TGACCGTGTT TGCCAATATC GATTATTCCA ATCCACTTAT GTCCGTTGAA ACGGGCACTG CAACCAAGCG TTATGAAAAT ACTTGGAGCA GTGTAGGTAT TAACTATTTC CCGATCCCTG AGATTGTGAT TAAAGCCGAA GGTGGTCTTC ATCAAGTGGC TGTTGCCAGT ATTCCTGACA CCAATTTCTT TGCTTTAGGT GTGGGATATC AGTTCTCGCT ATAA
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Protein sequence | MNRKLTLLAV SVASVLGLSV IPNAQAATNT ETLAKAIAKQ EAEITILKQQ LATLAAEQKQ QQQQNKQVTT QVDTVVQQTT KAQDRLSRFS FNSYGSAVYT SDEYFDNVQD TSAERRSRTD LERIVTEFGY QFTDDWSMEV EIEYEHGGTG TSLEYDGFDE FGEFESEVEA GGEVVVEKAE IRYRPSKAFG VKFGNIHLPI GLSSMLHKPN QYLTVQRHKS EAAMMPTVWN ENGIGVYGEI ADFHYQAQVV SGLNSEYFRT YDWVASGHQK RFEEVNADDL AFAGRIDYGN FKTGSAVGVA YYYGNTSGNR HKSNKLDVDG ALSIVSVAGA FVEGPWILRG QYLYGSLDNA DAITQANKTT PGLRPGNFAQ LGSESQSFFV EAGVKLDEWF DIPMTVFANI DYSNPLMSVE TGTATKRYEN TWSSVGINYF PIPEIVIKAE GGLHQVAVAS IPDTNFFALG VGYQFSL
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