| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0796 |
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| Symbol | |
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| ID | 4277892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 936633 |
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| End bp | 937526 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133564 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_749489 |
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| Protein GI | 114561976 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGTT CGATTATTAC CGAAATACTG CTGCCATTGT CGCTCGCCTT CATTATGTTT
GGCATGGGCT TAAGTTTAAC TCAATTTGAT TTTTTACGTT TATGGCAAAC TCCAATGCCG
ATTATTGGCG GCTTTATTGG CCAAATTATC GTGTTGCCTT TGTTGGCTTT TACTCTTTGT
TTGTTGATGG ACTTATCGCC AGCGATGTCG ATAGGGTTAA TGATTTTGGC TGCCTGCCCC
GGTGGCACAA CCTCAAATGT TGTAAGTCAT CTTGCTAAGG CTAATTTGGC ATTGTCAGTG
AGTTTGACTG CACTGAGTAG CATTGTGTGC GTATTCACCG CGCCGTTTAT CATCCAATTT
GCGGTTAGTT ATTTTAGTGA AACCCATGAT ATTGAGGTGT CGTTAAGCTG CATTTCATTA
GGGTTATTGG TGATTACCTT GCTACCGATT ATGTTTGGCA TGATTGTGCG GCGTTATTAT
CGCGATTGGG CTGTGAAGGT TGAGGTGTAT TTTAGGCGCT TTGCATTAGT GTTTTTATTG
TTGATGATTA CTGGGGTGGT GATTCAAGAG CGTGACATTA TCAGCGACGC TTTTAACGAG
GTGTTTATTG CATGCATGTT GTTAAATTTG ATTGCCATGA TGGTGGGCGT AATTACTGCC
AAGATATTCA AATTAAGCCA TAAAGATAGC CTAACGTTGG CCATTGAAAT AGGTTTGCAA
AACTCCACTA TGGCAATGCT TATTTGCATC AGTTTACTGC ATATGCCCAG TTATGCTGTG
GTAGCTGGAG TATACAGTTT AACCATGTAT TTGGGCGCAG GGTTATTGGT TCTTTATGCC
AGTTACAGCA ATTCCAATCG TAATCCTGTC ATTCAACCTA CTGACTCACA TTAG
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| Protein sequence | MTGSIITEIL LPLSLAFIMF GMGLSLTQFD FLRLWQTPMP IIGGFIGQII VLPLLAFTLC
LLMDLSPAMS IGLMILAACP GGTTSNVVSH LAKANLALSV SLTALSSIVC VFTAPFIIQF
AVSYFSETHD IEVSLSCISL GLLVITLLPI MFGMIVRRYY RDWAVKVEVY FRRFALVFLL
LMITGVVIQE RDIISDAFNE VFIACMLLNL IAMMVGVITA KIFKLSHKDS LTLAIEIGLQ
NSTMAMLICI SLLHMPSYAV VAGVYSLTMY LGAGLLVLYA SYSNSNRNPV IQPTDSH
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