| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0783 |
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| Symbol | |
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| ID | 4278700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 919350 |
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| End bp | 920252 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133551 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749476 |
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| Protein GI | 114561963 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATTT CATTAAAGCA GCTCAACGTG TTTACCTGTG TTACCCAACA TAAAACCTTA
ACCGCTGCAG CCAAGGCACT GTATCTGTCT AAAGCCGCGG TGAGCATGGC ACTTGCAGAA
CTCGAAAAAC AATTGGGTCA CCCGCTATTT GATCGGGTCA ATAATCGCTT GGTGCTTAAT
CAAGAAGGAC ACAAGTTATT ACCACTGGCC GATGAGCTGC TTAGTAGAGC AAATAATATC
AGTCAATTGT TTGATGCAGA CCACGCTTTT ACGGGTCAAT TGAAAATAGG TGCCAGTGAC
ACCTTAGGTA ATCATGTTGT ACCTGGGTTA TTGAGCCAAT TTAGACAGCA ACATCAACAT
TTCTCACAAA GCGTGGTGAT TTCAAATTCA CGCTTAATCT GCCAAAAACT GCTGGATTAC
GAGTTAGACA TTGGCTTGAT TGAGGGTAAA AGTCATCACC CAGAACTTAT CGCCACTCAG
TTTAGTCATG ATGAAATGTG TATTATCGCT GCGCCTCATT TACCCATAAG TCTGCAGGCA
CAATGGACGT TTAACGATTT AGAACAAAGT GAATGGATAT TACGTGAAGC AGGTTCTGGC
TCGAGAGAGT TTTTTTTACG TACTATCGCG CCGCAAATAG AATCGTGGCA TGAAGTGTTT
GAACTTAACA CTACTGAGGC ATTAATTAAC AGTGTCGCCG CTGGACTTGG CTTAGGATGT
TTATCTGCTT TGGGGGCACA ATATGCGATT AACGATGGCC GTGTGACTCA GCTCGACTCC
CCAATTAAGG GGAATCATAT TAATATGCAG CGACCGTTTT GGTTGGTGGT TCACAAAGAT
AAATATCACA GCCCGCTGTT GAAAAGCTTT ATTGAGTTTT GTCATCAATG GGATAATTCA
TAA
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| Protein sequence | MHISLKQLNV FTCVTQHKTL TAAAKALYLS KAAVSMALAE LEKQLGHPLF DRVNNRLVLN
QEGHKLLPLA DELLSRANNI SQLFDADHAF TGQLKIGASD TLGNHVVPGL LSQFRQQHQH
FSQSVVISNS RLICQKLLDY ELDIGLIEGK SHHPELIATQ FSHDEMCIIA APHLPISLQA
QWTFNDLEQS EWILREAGSG SREFFLRTIA PQIESWHEVF ELNTTEALIN SVAAGLGLGC
LSALGAQYAI NDGRVTQLDS PIKGNHINMQ RPFWLVVHKD KYHSPLLKSF IEFCHQWDNS
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