Gene Sfri_0722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0722 
SymbolhemA 
ID4278364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp848490 
End bp849740 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content43% 
IMG OID638133493 
Productglutamyl-tRNA reductase 
Protein accessionYP_749418 
Protein GI114561905 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.131936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTAG TAATAATCGG GATAAACCAT AAAACCGCCA CGGTAGATTT GCGTGAAAAA 
GTCGCTTTCT CTCCAGACCG CATTCATGAT GCCATGAAAA GCTTGGCCAG TCGCACCCGC
ACGGGTGAGG CTGTTATTGT GTCTACCTGT AACCGTACTG AGCTATATTG CAATAATGCT
GAAAAGGAAG ACATTATTGA ATGGTTAGAG GATTATCATG GTTTAGATCA TAACGATTTA
ATGCCGTGTA TCTATGCTTA TGAAGAACAA GTAGCCGTCA AACATTTAAT GCGGGTAGCA
TCGGGTTTAG ATTCTCTGGT GCTTGGCGAG CCGCAAATTT TAGGGCAGGT CAAACAAGCG
TTTGTAAAAG CCAAAGAAGC GGGCACTATC GCATTAACGA TTGATCGTTT ATTTCAAAAT
ACTTTTTCTG TGGCTAAAAA AGTACGTACA GACACTGAGA TTGGTGCCGC AGCAGTTTCT
GTTGCCTTTG CCGCTGTTAG CATGGCGAAG CATATTTTCT CATCATTGAG CACCACTAAA
GTGTTACTCA TTGGCGCCGG AGAAACCATT GAATTAGTTG CCAAGCACCT TAAAGATAAT
GGTGTTGCTT CTATGGTGGT GGCAAATCGT ACTATTGAAC GTGCTCAAGC CATGTGTGAA
GAGTTTAATG CGACCGCAAT TACCCTAGAA CAAATACCAG ACTTTCTCCC TAAAGCCGAT
ATCGTGATAT CCTCTACCGC CAGCCCTTTG CCTATTTTAG GTAAAGGAAT GGTCGAAAAA
GCGCTAAAAC AGCGTCGTCA CCAACCTATG TTGTTGGTGG ATATTGCAGT TCCAAGAGAT
ATTGAAGCAG AAGTCGGTGA GTTAGACGAC GCATTCCTTT ATACTGTAGA CGATCTGCAT
AGCATAATTG AACAGAACAT GGCTTCACGT AAAGAAGCCG CCGAGCAAGC AGAATTAATT
ACTGAAGATC AATCACACAT ATTTATGGAG TGGATTAGGT CTTTAGAGTC AGTCGACAGT
ATTCGCGAAT ATCGCAGCCA GAGCTTGGCT ATTAAAGATG AATTAGTTGA ACGTGCCTTG
AATAAATTAT CTCAAGGCAG TGATAGTGAA CAAGTGATAC TTGAGCTAGC CAATAGGCTG
ACCAATCGTT TGATACATTC ACCGACACAA GCGCTCACTT CAGCAAGCCG TCAAGGCGAT
TTGAATACGT TAGGCCAATT AAGATCTGCG CTTGGTTTAG ATAAAAACTA A
 
Protein sequence
MSLVIIGINH KTATVDLREK VAFSPDRIHD AMKSLASRTR TGEAVIVSTC NRTELYCNNA 
EKEDIIEWLE DYHGLDHNDL MPCIYAYEEQ VAVKHLMRVA SGLDSLVLGE PQILGQVKQA
FVKAKEAGTI ALTIDRLFQN TFSVAKKVRT DTEIGAAAVS VAFAAVSMAK HIFSSLSTTK
VLLIGAGETI ELVAKHLKDN GVASMVVANR TIERAQAMCE EFNATAITLE QIPDFLPKAD
IVISSTASPL PILGKGMVEK ALKQRRHQPM LLVDIAVPRD IEAEVGELDD AFLYTVDDLH
SIIEQNMASR KEAAEQAELI TEDQSHIFME WIRSLESVDS IREYRSQSLA IKDELVERAL
NKLSQGSDSE QVILELANRL TNRLIHSPTQ ALTSASRQGD LNTLGQLRSA LGLDKN