Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0722 |
Symbol | hemA |
ID | 4278364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 848490 |
End bp | 849740 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133493 |
Product | glutamyl-tRNA reductase |
Protein accession | YP_749418 |
Protein GI | 114561905 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0373] Glutamyl-tRNA reductase |
TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.131936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTAG TAATAATCGG GATAAACCAT AAAACCGCCA CGGTAGATTT GCGTGAAAAA GTCGCTTTCT CTCCAGACCG CATTCATGAT GCCATGAAAA GCTTGGCCAG TCGCACCCGC ACGGGTGAGG CTGTTATTGT GTCTACCTGT AACCGTACTG AGCTATATTG CAATAATGCT GAAAAGGAAG ACATTATTGA ATGGTTAGAG GATTATCATG GTTTAGATCA TAACGATTTA ATGCCGTGTA TCTATGCTTA TGAAGAACAA GTAGCCGTCA AACATTTAAT GCGGGTAGCA TCGGGTTTAG ATTCTCTGGT GCTTGGCGAG CCGCAAATTT TAGGGCAGGT CAAACAAGCG TTTGTAAAAG CCAAAGAAGC GGGCACTATC GCATTAACGA TTGATCGTTT ATTTCAAAAT ACTTTTTCTG TGGCTAAAAA AGTACGTACA GACACTGAGA TTGGTGCCGC AGCAGTTTCT GTTGCCTTTG CCGCTGTTAG CATGGCGAAG CATATTTTCT CATCATTGAG CACCACTAAA GTGTTACTCA TTGGCGCCGG AGAAACCATT GAATTAGTTG CCAAGCACCT TAAAGATAAT GGTGTTGCTT CTATGGTGGT GGCAAATCGT ACTATTGAAC GTGCTCAAGC CATGTGTGAA GAGTTTAATG CGACCGCAAT TACCCTAGAA CAAATACCAG ACTTTCTCCC TAAAGCCGAT ATCGTGATAT CCTCTACCGC CAGCCCTTTG CCTATTTTAG GTAAAGGAAT GGTCGAAAAA GCGCTAAAAC AGCGTCGTCA CCAACCTATG TTGTTGGTGG ATATTGCAGT TCCAAGAGAT ATTGAAGCAG AAGTCGGTGA GTTAGACGAC GCATTCCTTT ATACTGTAGA CGATCTGCAT AGCATAATTG AACAGAACAT GGCTTCACGT AAAGAAGCCG CCGAGCAAGC AGAATTAATT ACTGAAGATC AATCACACAT ATTTATGGAG TGGATTAGGT CTTTAGAGTC AGTCGACAGT ATTCGCGAAT ATCGCAGCCA GAGCTTGGCT ATTAAAGATG AATTAGTTGA ACGTGCCTTG AATAAATTAT CTCAAGGCAG TGATAGTGAA CAAGTGATAC TTGAGCTAGC CAATAGGCTG ACCAATCGTT TGATACATTC ACCGACACAA GCGCTCACTT CAGCAAGCCG TCAAGGCGAT TTGAATACGT TAGGCCAATT AAGATCTGCG CTTGGTTTAG ATAAAAACTA A
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Protein sequence | MSLVIIGINH KTATVDLREK VAFSPDRIHD AMKSLASRTR TGEAVIVSTC NRTELYCNNA EKEDIIEWLE DYHGLDHNDL MPCIYAYEEQ VAVKHLMRVA SGLDSLVLGE PQILGQVKQA FVKAKEAGTI ALTIDRLFQN TFSVAKKVRT DTEIGAAAVS VAFAAVSMAK HIFSSLSTTK VLLIGAGETI ELVAKHLKDN GVASMVVANR TIERAQAMCE EFNATAITLE QIPDFLPKAD IVISSTASPL PILGKGMVEK ALKQRRHQPM LLVDIAVPRD IEAEVGELDD AFLYTVDDLH SIIEQNMASR KEAAEQAELI TEDQSHIFME WIRSLESVDS IREYRSQSLA IKDELVERAL NKLSQGSDSE QVILELANRL TNRLIHSPTQ ALTSASRQGD LNTLGQLRSA LGLDKN
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