| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0713 |
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| Symbol | |
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| ID | 4278355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 837730 |
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| End bp | 839154 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133477 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_749409 |
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| Protein GI | 114561896 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0124358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AACTTCATAT TAAGACCTGG GGCTGTCAAA TGAATGAGTA TGACTCATCA
AAGATGGCCG ATTTATTAGA CGACTATCAA GGATATACCT TGACCGAAGA TGCGAGCGAA
GCAGACGTAC TGCTGCTTAA TACTTGCTCT ATTCGTGAAA AAGCACAGGA GAAGGTATTC
CATCAGCTAG GGCGTTGGAA ATCTTTAAAA GATAAAAATC CTAATTTAAT TATTGGGGTC
GGCGGTTGTG TTGCCTCACA GGAAGGTAAA GCGATTAAAG ATCGCGCTCA ATGCGTTGAT
ATTATCTTTG GGCCACAAAC ACTGCATCGC TTACCTGAGA TGATTGAACA AATTCAACGC
GGCGAAAAAG CCGTGATTGA TATCAGCTTC CCAGAAATTG AAAAGTTCGA TCGTCTTCCT
GAGCCTCGCG CTGATGGTCC AACCGCGTTC GTATCAATTA TGGAAGGTTG CAGTAAGTAC
TGTTCTTTCT GCGTGGTACC TTATACCCGC GGTGAAGAGG TCAGCCGTCC GTTAGATGAC
GTTATTCTTG AAGTGGCTCA ATTAGCCGCC CAAGGTGTAC GTGAAGTGAA TTTATTGGGG
CAAAACGTTA ACGCGTATCG CGGTGCAACT CATGATGATG AGATATGTAC CTTTGCGGAA
TTATTGCGCC TAGTGGCCTC AATTGATGGT ATCGACCGTC TGCGTTTTAC CACTAGCCAC
CCAATTGAAT TCACCCAAGA CATTATCGAT GTGTATGAAG ACACGCCTGA ATTGGTGAGC
TTCCTGCATT TACCGGTGCA ATCGGGTTCG GATCGTATTT TGACCCAAAT GAAACGCGGT
CACATGGCGA TTGAGTATAA GTCGATTATT CGTCGCTTGC GTAAAGCACG TCCAGATATT
CAAATTAGCT CAGATTTTAT TATTGGTTTC CCTGGTGAAT CTAAAGACGA TTTCGCTGAT
ACCATGAAAC TGATTGAAGA TGTTGCGTTT GACCACAGCT TTAGCTTTAT CTACAGCGCT
CGTCCAGGTA CGCCTGCAGC AGATTTGCCT GATGATGTTA GCGACGAAGA AAAGAAGCAA
CGTTTAGCCA TTTTACAAGA CCGTATTACC CAACAAGCAA TGCGTTATAG CCGTCAAATG
CTGGGCACTG TTCAACGTAT TTTAGTTGAA GGTCCTTCAG TGAAGAATCC AATGGAACTT
CGCGGTCGAA CTGAAAACAG TCGTGTGGTT AACTTTGAAG CCGCTCACAC TCATATCGGT
AGTTTCGTTG ATGTGAAAAT TGTTGATGTT TATACCAACT CATTACGCGG TGAATTTGTC
CGTGGTGAAA ATGAAATGGA TTTACGTCGC AGTTTACGTC CGGCTGAAAT TCTGGCTAAA
CACAAGCAAG ATGACGCATT AGGTGTGACC CACTTTAAGC CGTAA
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| Protein sequence | MSKKLHIKTW GCQMNEYDSS KMADLLDDYQ GYTLTEDASE ADVLLLNTCS IREKAQEKVF
HQLGRWKSLK DKNPNLIIGV GGCVASQEGK AIKDRAQCVD IIFGPQTLHR LPEMIEQIQR
GEKAVIDISF PEIEKFDRLP EPRADGPTAF VSIMEGCSKY CSFCVVPYTR GEEVSRPLDD
VILEVAQLAA QGVREVNLLG QNVNAYRGAT HDDEICTFAE LLRLVASIDG IDRLRFTTSH
PIEFTQDIID VYEDTPELVS FLHLPVQSGS DRILTQMKRG HMAIEYKSII RRLRKARPDI
QISSDFIIGF PGESKDDFAD TMKLIEDVAF DHSFSFIYSA RPGTPAADLP DDVSDEEKKQ
RLAILQDRIT QQAMRYSRQM LGTVQRILVE GPSVKNPMEL RGRTENSRVV NFEAAHTHIG
SFVDVKIVDV YTNSLRGEFV RGENEMDLRR SLRPAEILAK HKQDDALGVT HFKP
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