| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0711 |
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| Symbol | |
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| ID | 4278353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 836027 |
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| End bp | 836497 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133475 |
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| Product | putative metalloprotease |
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| Protein accession | YP_749407 |
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| Protein GI | 114561894 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.655872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAGC AAGGGATATC ATTAGATCTC GACCTACAAA TTGCAGTCGA TAATCCACGC
TTACCAACTC AAGCTGAGTT TGAAACTTGG GTTCGAGCCG CTATTGGCCA AACAAAGCCA
GTAGTAGAGT TAACTATTCG TATTGTTGAT ATTGCCGAGA GTCAGCAGCT CAATTCAACT
TATCGCGGTA AAGACAAGCC AACTAATGTA TTGTCGTTTC CGTTTGAAGC GCCGCCAGAA
GTTGAATTGC CATTATTGGG TGACCTCGTT ATCTGCGCAC CAGTGGTGGA ACAAGAAGCA
ATTGAGCAAA ATAAACCGCT AATCGCTCAC TGGGCACACA TGGTCATACA CGGTAGCTTG
CATTTGCTGG GCTATGACCA TATTATCGAC GAAGAAGCCG ATGAGATGGA GTCATTAGAG
ACCCAACTTG TTGAAGGCTT AGGTTTTGAC AATCCCTATA AGGAAGCATA A
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| Protein sequence | MSQQGISLDL DLQIAVDNPR LPTQAEFETW VRAAIGQTKP VVELTIRIVD IAESQQLNST
YRGKDKPTNV LSFPFEAPPE VELPLLGDLV ICAPVVEQEA IEQNKPLIAH WAHMVIHGSL
HLLGYDHIID EEADEMESLE TQLVEGLGFD NPYKEA
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