| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0708 |
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| Symbol | |
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| ID | 4278350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 833012 |
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| End bp | 833524 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133472 |
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| Product | methylation site containing protein |
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| Protein accession | YP_749404 |
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| Protein GI | 114561891 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0386199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAT CGATTCAACT CAAAACGCAG GTTCTCTCAA AAGGATTTAC CTTAATAGAG
TTAGTTGTGG TCATCATTAT CCTTGGTATT TTAGCGATGG TTGCAGCGCC TAAATTTATT
GGTTTGAGTA CCGAAGCGAG ACAGAGCACT CTATCAGGCC TCATGGGCAG CATTAAAACA
GCCAACACCC TAGTTTATGC CCGTTCAAAA ATGACGAGTT TACGAGTGCG GGCTGTCACA
AACCGCGATG ACTTAATCGA TATTGATATC GACAGCGACG GTGTATTTGA AACTCGGTTA
AAATGGGGCT ATTTAGACAA CACGGACATT GAAAAATGGA TCATTGTGGA TGACGCTTTT
ACCATACAAT ATCAAGGAAT TGCTGTTACT TATATCGGAT ACGATAAAGA TGATAATGGC
CAAGTCATCA ATGACAATTG TTACTTCTCT TACACTCAAG CCGCAGATGT AAATACAGCA
CCTGAATATC AAACTGTAGT AAGTGGTTGC TAA
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| Protein sequence | MSQSIQLKTQ VLSKGFTLIE LVVVIIILGI LAMVAAPKFI GLSTEARQST LSGLMGSIKT
ANTLVYARSK MTSLRVRAVT NRDDLIDIDI DSDGVFETRL KWGYLDNTDI EKWIIVDDAF
TIQYQGIAVT YIGYDKDDNG QVINDNCYFS YTQAADVNTA PEYQTVVSGC
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