Gene Sfri_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0701 
Symbol 
ID4278744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp826565 
End bp826894 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content40% 
IMG OID638133465 
Productiojap-like protein 
Protein accessionYP_749397 
Protein GI114561884 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000119797 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGGCA CCGAACTAAA AGATTTCGTT ATCGACAAAG TCGATGATTT AAAAGCAAAA 
AATATTACTG TTATAGATGT ATCTAAACGG TCAACCATTA CCGACACTAT GATCATTTGT
ACTGGTACAT CAAAAACACA CGTTCGATCT ATTGGTGAGC ACGTAATCGT GTCAGCAAAA
AATGCTGGCG TGCAACCTCT TGGGGTCGAA GGTCGTGACA GCAGTGAATG GGTATTAGTT
GATTTAGGCT CAGTGATTTT GCATGTGATG CAAGAACAAA CTCGTGATTA CTACGAGCTT
GAAAAACTTT GGTCTGAACA CAGCGTCTAA
 
Protein sequence
MQGTELKDFV IDKVDDLKAK NITVIDVSKR STITDTMIIC TGTSKTHVRS IGEHVIVSAK 
NAGVQPLGVE GRDSSEWVLV DLGSVILHVM QEQTRDYYEL EKLWSEHSV