Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0698 |
Symbol | |
ID | 4278741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 823006 |
End bp | 824127 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133462 |
Product | rod shape-determining protein RodA |
Protein accession | YP_749394 |
Protein GI | 114561881 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0484762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGGTA AAACCGTGAA TAATCATGCA TATCAAAAAT CGTTTTGGCA AAAAATACAC TTAGATGTGC CATTACTCAT CGGCATCGTT ATTTTAATGA GCTTTGGTCT TTTTGTGATT TATTCTGCCA GTGGCGAAGA TCCTGCGATG ATGGAGCGCC AACTTGTACG TATGGCGTTG TCGTTGGGCG TGATGTTTTG CTTTGCACAA ATCAATCCAG AAATCCTCAG GCGTTGGGCT TTACCTATTT ATCTTGCAGG GGTAGCGTTA CTCATCGGCG TTGAACTATT TGGCACCATT AATAAAGGTG CTCAGCGCTG GCTTAATTTA GGGTTTATGG AATTCCAGCC ATCGGAACTT ATCAAACTTG CCTTCCCCAT AACCATGGCG TGGTATATCA GTAAGTTCCC GCTGCCCCCC AAAAAGCGCT ATCTGGCCGG TGGCGTTATT ATCCTACTAA TCCCAACATT ACTCATCGCT AAACAACCGG ATTTAGGCAC CTCCATTTTG GTCGCTGCTT CTGGGGTATT CGTGTTGTTT TTATCTGGCA TGAGTTGGTT AATTGTCGGC GGCTTTGTTA CCGCCATTCT GATCTTTTTA CCTGTTTTAT GGTTTTTCTT GATGCACGAT TATCAGCGTA CTCGAGTATT AACCTTGTTT AATCCTGAAC AAGATCCTCT CGGCGCGGGT TATCATATTA TCCAATCGAA AATTGCCATT GGTTCAGGTG GACTTTGGGG AAAAGGTTGG CTTGACGGGA CTCAATCACA ATTAGAGTTT TTACCTGAGC GACACACCGA CTTTATCTTT GCTGTGATCG GTGAGGAATT CGGATTAATT GGCAGTTTAG TATTACTGGC AATGTATTTA TTTGTCATTG GCAGGGGTCT GGTTATCGCT TCACGAGCAC AGACAAGTTT TGCACGCTTA TTGGCCGGAA GCATCACCCT AACGTTTTTT GTCTATGTTT TTGTTAACAT AGGTATGGTA TCAGGCATCT TACCAGTGGT TGGTGTACCT TTGCCGCTAA TCAGTTATGG TGGAACCTCG ATGCTGACCT TAATGACAGG TTTTGGTATT TTAATGAGCA TTCACACCCA CAGACGATTT GTCGATAGAT AG
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Protein sequence | MGGKTVNNHA YQKSFWQKIH LDVPLLIGIV ILMSFGLFVI YSASGEDPAM MERQLVRMAL SLGVMFCFAQ INPEILRRWA LPIYLAGVAL LIGVELFGTI NKGAQRWLNL GFMEFQPSEL IKLAFPITMA WYISKFPLPP KKRYLAGGVI ILLIPTLLIA KQPDLGTSIL VAASGVFVLF LSGMSWLIVG GFVTAILIFL PVLWFFLMHD YQRTRVLTLF NPEQDPLGAG YHIIQSKIAI GSGGLWGKGW LDGTQSQLEF LPERHTDFIF AVIGEEFGLI GSLVLLAMYL FVIGRGLVIA SRAQTSFARL LAGSITLTFF VYVFVNIGMV SGILPVVGVP LPLISYGGTS MLTLMTGFGI LMSIHTHRRF VDR
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