Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0692 |
Symbol | |
ID | 4278735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 817670 |
End bp | 818635 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133456 |
Product | lipoyl synthase |
Protein accession | YP_749388 |
Protein GI | 114561875 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAGGC CTGAAAGATT ACAACCAGGT GTCAAATTAC GTGATGCCGA TAAAGTCGCA CGAATTCCTG TAAAAGTCGT GCCATCAGAG CGCGAAACTA TGCTGCGTAA ACCGGATTGG TTACGAGTAA AATTACCCTC TTCAAATCAA CGTATTCTCG AGATAAAAGC GGCATTACGT AAAAACGGAT TACACTCAGT TTGTGAAGAA GCATCTTGCC CTAACTTAGC AGAATGCTTT AACCACGGCA CAGCAACCTT TATGATCTTA GGTGCAATCT GTACCCGTCG TTGCCCTTTT TGTGATGTGG CCCATGGTCG TCCGCTAAAA GCTGATGCTG ACGAGCCTAA AAAACTAGCC CAAACGATTA AAGACATGAA GTTAAAATAT GTGGTGATCA CTTCTGTTGA CCGTGATGAT TTACGGGATG GTGGTGCACA GCACTTTGCG GACTGTATTC GCGAAATTCG TTTATTAAAC CCTGAAATCA AGATTGAAAC TCTTGTTCCT GATTTCCGTG GTCGTATCGA TGCCGCATTA GATATTTTAG CGACCGAGCC TCCTGATGTA TTTAATCATA ATCTTGAAAC GGCTCCTGCT CATTACCGCA AAGCACGTCC AGGCGCTAAC TATCAGTGGT CATTAGACCT ACTTAAACGC TTTAAAGAGC GTCATCCAAC TATTCCGACT AAGTCTGGTT TAATGATGGG TTTAGGTGAA ACCAACGAAG AGATAGCCGA AGTATTACGA GATTTACGCG CTCACAACGT AGAAATGCTC ACGCTTGGCC AATACTTACA ACCGTCTAAA TTTCATCTAC CCGTTGAACG TTATGTTCCA CCAGCAGAAT TTGATGAGTT GAAAGCGTTA GCTGATGAAC TTGGTTTCAC ACATGCAGCC TGTGGCCCAC TTGTTCGCTC AAGCTACCAC GCAGACTTAC AAGCTCAAGG TAAAGAAGTT AAGTAA
|
Protein sequence | MNRPERLQPG VKLRDADKVA RIPVKVVPSE RETMLRKPDW LRVKLPSSNQ RILEIKAALR KNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK ADADEPKKLA QTIKDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRLLN PEIKIETLVP DFRGRIDAAL DILATEPPDV FNHNLETAPA HYRKARPGAN YQWSLDLLKR FKERHPTIPT KSGLMMGLGE TNEEIAEVLR DLRAHNVEML TLGQYLQPSK FHLPVERYVP PAEFDELKAL ADELGFTHAA CGPLVRSSYH ADLQAQGKEV K
|
| |