Gene Sfri_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0689 
Symbol 
ID4278732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp815553 
End bp816230 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content39% 
IMG OID638133453 
ProductYheO domain-containing protein 
Protein accessionYP_749385 
Protein GI114561872 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGA ACGCATACAA ATCATTCAAT ATTGTGTTTA CAGATAAAGA CAAAGAATTT 
ATGAAATCCA ATTTCCGCTT GGCAGAAACC GTAGCGGAAT TTATAGGGCC TCATTGTGAA 
GTGGTGGTCC ATTCATTCGA AAGCTTCGAG CATTCCGTCG TTAAAATTGT CAACGGACAT 
CATACCGGCC GAACCGTGGG TTCACCGATT ACCGATATGG GTCTGAAAAT GCTTCGCGCT 
TTTGAGAAAA CAGGAGATGC GACACCCAAA AGCTATTTCA CTAGAATCAA AGACGGATCT 
TTACTGAAAT CTACAACATG TGTACTCGCT GGGGAGAATG AAAAACCAAT AGGATTATTT 
TGTGTTAATG CCAACTTATC CTACCCATTT ACCGAAATCA TTAAAACATT AATGCCCGAG 
ACGGCAAGCG CTTCAATCGG TGTTAATGAG AACTTTAGTT CATCTCCAAG TGAATTAATT 
GAAAAAGCGC TTGAGAATGC AATTATTCAA GTTGAAAACG ACGAAAAAAT CAACTTGAAA 
GGGAAAAATA AAGCCATAAC CAAACTGCTG TTTGAAAACG GAATTTTCGA ACTTAAAGAG 
GCAACAAACA CGGTTGCAGA ACGGCTAGGA ATAACTCGTC ATGCTATTTA TAAGTATATT 
CGCGAGTTTA GAACGTAA
 
Protein sequence
MTMNAYKSFN IVFTDKDKEF MKSNFRLAET VAEFIGPHCE VVVHSFESFE HSVVKIVNGH 
HTGRTVGSPI TDMGLKMLRA FEKTGDATPK SYFTRIKDGS LLKSTTCVLA GENEKPIGLF 
CVNANLSYPF TEIIKTLMPE TASASIGVNE NFSSSPSELI EKALENAIIQ VENDEKINLK 
GKNKAITKLL FENGIFELKE ATNTVAERLG ITRHAIYKYI REFRT