| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0666 |
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| Symbol | |
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| ID | 4278187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 777913 |
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| End bp | 778674 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133425 |
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| Product | putative lipoprotein |
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| Protein accession | YP_749364 |
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| Protein GI | 114561851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0926044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAAA TTGCCAAAGG TGCCGCCCTA GTATTACTTT CACTGGCTAT AACAGCCTGT
AGTAGCAGTC CAGAAGACGA TGATGTTGCC AGTAAAGCAT CACCTGATGT CCTGTACTCT
CAAGCAAGAA CGTCAATGGA ATTAGGTAAT TACTCTAAAG CCGTTCGTTC ACTTGAAGCA
TTGGATTCTC GTTTTCCATT TGGTCCGCAC AAAACTCAAG TTCAATTAGA CTTGATTTTT
GCGTATTACA AAATGGATGA TGCTGCCTCA GGACTTGCCA ATATTGATCG CTTTTTACGC
CTCAATCCAA CGCATCCTAA TATAGATTAC GTCTATTATA TGCGTGGTTT AACGAATATG
CAGGCAGATA ATTACTTATT TCACGATTTA ATGAATATTG ATCGTACCGA TCGTGATCCT
AAAAATGCTC AAGATGCATT TAAAGATTTT GATCGATTGA TTAAATCGTA TCCAAATAGC
AAGTATTCTG CTGATGCACA ACAACGCATG CAGTTCTTAA AGAACCGTTT GGCTAAATAT
TCAATTCAAG TTGCAGAATA TTATATCAAA ATGAATGCAT GGAGTGCAGC TGCTGTTCGT
GCTCAATCAG TTATGGAAAA GTTCCCTGGA ACACCATCAA CTGAACGCGC GTTAGAAATT
ATGGTTAAAG CGTATGGCGA ATTAGGCCAG GAAAAATTAC AACAAAACGT TAAAACCGTA
ATGAAAGCAA ACTTTCCAAC TAACGAAGTA TTATCTAACT AG
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| Protein sequence | MYKIAKGAAL VLLSLAITAC SSSPEDDDVA SKASPDVLYS QARTSMELGN YSKAVRSLEA
LDSRFPFGPH KTQVQLDLIF AYYKMDDAAS GLANIDRFLR LNPTHPNIDY VYYMRGLTNM
QADNYLFHDL MNIDRTDRDP KNAQDAFKDF DRLIKSYPNS KYSADAQQRM QFLKNRLAKY
SIQVAEYYIK MNAWSAAAVR AQSVMEKFPG TPSTERALEI MVKAYGELGQ EKLQQNVKTV
MKANFPTNEV LSN
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