| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0665 |
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| Symbol | |
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| ID | 4278186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 775358 |
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| End bp | 777082 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133422 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_749363 |
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| Protein GI | 114561850 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0729862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTCATA AAATAGTCCG TCGCCCTCAG GTTGATGATA GTCATTTACC TGCTTCTTTA
TCACCATTAC TGAAACAGCT CTATGCTCGC CGTGGCGTCA ATGAAGATAA CTGCGAATTA
GTGCTAAGTA AGTTATTGCG CCCAGATACC ATGAAAGGGC TTGCAGAAGC CGCTGTGATT
ATTGCGGATG CTATTGCTGC GCAGCAATCG ATTCTGATTG TTGGAGATTT TGATGCTGAT
GGTGCCACGT CGACTAGTGT GTGTATGTTG GCGCTGAAAA TGATGGGGGC TAAGCATGTT
GACTACCTTA TTCCCAATCG GTTTGATTAT GGTTATGGCT TAAGCCCTGA AATTGTTGCG
GTGGCTTTTA CTAAAAATGC AGATGTACTC ATTACCGTTG ATAATGGTAT TTCGTCAATT
GAAGGGGTGG CAGCAGCAAA GTTGCTGGGA ATGACTGTTA TCGTGACAGA CCACCATTTA
CCTGGCAGCA CTTTGCCCAA TGCTGATGTT ATTGTTAATC CAAATCAGCC CGGTTGTCAG
TTTGCCAGTA AGTCTATTGC CGGTGTTGGG GTAGCGTTTT ATCTGATGTC TGCTTTACGT
GCAGAATTAA GGCAGCGTAA TTGGTATCAA CAACAGCAAA TTACTGAGCC TAATCTGGGC
ACATTGCTTG ATATTGTCGC TTTAGGTACT GTCGCAGATG TTGTGTCGCT AGACACGAAT
AACCGTATTC TAGTCAATGC TGGTTTGCAG CGAGTCAGAA GTGGCCGCTG TCGTGTTGGC
ATTACAGCAT TGCTTGAAGT GGCTAAGCGG AGTCCTGAAA AGATTGTTGC TGCTGATTTT
GGTTTTGCAG TTGGACCTCG GCTCAATGCT GCTGGTCGTT TAGATGAAAT GGCACTAGGG
GTTGAAACTT TACTGTGTGA AGACATCATG TTAGCCAGAA GAATGGCAGC CGAATTAGAT
GGATTAAACC AAGAGCGCCG CGAACTTGAA ACGGGTATGC AGCAAGAGGC ATTAAAGAGT
TTATCGAAAG TGTCGCTCAA TGAAGAAGAT TTGCCGTGGG GTATCGCCAT TTTTCAGGAA
GATTGGCATC AAGGTGTTAT TGGCATTTTG GCCTCACGAA TTAAGGATCG TTATCATCGG
CCGGTTATTG CCTTTGCCGA TGCCGGTGAT GGTGCGATAA AAGGTTCTGC CCGGTCGATT
AAAGGCCTGC ATATGCGAGA TTTACTCGAA CGCATTAATG GTCTCTATCC TGGAATGATA
ACCAAGTTTG GTGGTCATGC TATGGCAGCA GGGCTATCGT TAAAAGCAGA TGTGTTCGAG
CAGTTTAAGC AAGCTTATGA TGATGCGGTA AGAGAAGTAT TAGATTATGA ACAGCTGACG
GGAGAGTTGC TCTCTGATGG TGAGTTATCG AGCCCATTAA TGACGCTTGA TACAGCATTT
TTATTACGAA ATGCAGGACC ATGGGGGCAG TCCTTTGAAG AGCCACTGTT TGATGGCGTA
TTTAAGGTCG TGCAACAGCG TATCGTAGGT GAAAAACACT TAAAATTATT ACTTGAGACT
GAATGTGGCA GTACGATGTT AGACGGCATT GCTTTTAATG TGGATTTAGC CATATGGCCT
GATGCAACCA TTAAACATGC TCGTGTGGTC TATAAGCTTG ATGTGAACGA GTTTAGAGGA
AATCAAACTG TGCAGCTAAT GGTGGATTAT ATTGAGCCCA TGTAA
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| Protein sequence | MSHKIVRRPQ VDDSHLPASL SPLLKQLYAR RGVNEDNCEL VLSKLLRPDT MKGLAEAAVI
IADAIAAQQS ILIVGDFDAD GATSTSVCML ALKMMGAKHV DYLIPNRFDY GYGLSPEIVA
VAFTKNADVL ITVDNGISSI EGVAAAKLLG MTVIVTDHHL PGSTLPNADV IVNPNQPGCQ
FASKSIAGVG VAFYLMSALR AELRQRNWYQ QQQITEPNLG TLLDIVALGT VADVVSLDTN
NRILVNAGLQ RVRSGRCRVG ITALLEVAKR SPEKIVAADF GFAVGPRLNA AGRLDEMALG
VETLLCEDIM LARRMAAELD GLNQERRELE TGMQQEALKS LSKVSLNEED LPWGIAIFQE
DWHQGVIGIL ASRIKDRYHR PVIAFADAGD GAIKGSARSI KGLHMRDLLE RINGLYPGMI
TKFGGHAMAA GLSLKADVFE QFKQAYDDAV REVLDYEQLT GELLSDGELS SPLMTLDTAF
LLRNAGPWGQ SFEEPLFDGV FKVVQQRIVG EKHLKLLLET ECGSTMLDGI AFNVDLAIWP
DATIKHARVV YKLDVNEFRG NQTVQLMVDY IEPM
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