Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0664 |
Symbol | |
ID | 4278185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 774487 |
End bp | 775242 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133421 |
Product | thiol:disulfide interchange protein DsbC |
Protein accession | YP_749362 |
Protein GI | 114561849 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0629017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCGT GTAATATAGG AATTACCATG AAGTTAACTA AAGCATTCGC CCTTGTTGCC AGCCTTATTA TTGCCCCTAT TGTGTCAGCG GCAACTGCGA CCGATGTATC CAATGAATCA GCATTAAAGC AAAAACTCAC TGAAACCTTA GGGGTCAACG TGATGCTCAT TCAACAATCT CCAGTCGATG GTTTATATCA AGCACTAACA GACCGCGGAG TCCTATACGT CACCAAAGAT GGCGCAAAGC TATTTCATGG CAATCTGTAT GACATGGATA AAGGCATGAA AAACTTAACT GAGGCAGCTT TAGCTGGACC TCGTATTGAG TTACTTAAGC CGTTTGAAGA TGAGATGTTG GTTTACAAAG CGAAAAACGA AAAGCATGTG GTCACAATAT TTACCGACGT AGATTGTGGT TATTGCCGTA AGCTGCATAA TCAAATGCAA GGCTATAATG ATTTAGGTAT TACGATTCGT TATTTAGCTT ATCCTCGTGC GGGCATTCCA TCTGCTAATG CAGACGAGAT GCAAGCGGTA TGGTGTGCTA AAGATCCTTT AAAAGCGATG ACAGAAGCTA AAAATGGTGG CAATGTTAAA GCGGCTAGTT GTGATATTGA TATTGCAGCG CAGTATAAGT TAGGTATGTC ATTCGGTGTT AACGGCACAC CAGCGTTGAT TTTAGAAAAT GGTGTGATGG TACCTGGTTA TCAAGCTCCG GCAGACTTAT TACGTACGAT TGAATCGAAT TTATAA
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Protein sequence | MNPCNIGITM KLTKAFALVA SLIIAPIVSA ATATDVSNES ALKQKLTETL GVNVMLIQQS PVDGLYQALT DRGVLYVTKD GAKLFHGNLY DMDKGMKNLT EAALAGPRIE LLKPFEDEML VYKAKNEKHV VTIFTDVDCG YCRKLHNQMQ GYNDLGITIR YLAYPRAGIP SANADEMQAV WCAKDPLKAM TEAKNGGNVK AASCDIDIAA QYKLGMSFGV NGTPALILEN GVMVPGYQAP ADLLRTIESN L
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