Gene Sfri_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0646 
Symbol 
ID4278602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp748322 
End bp749473 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content45% 
IMG OID638133403 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_749344 
Protein GI114561831 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00167645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC ACTTGTTTAC CTCTGAGTCT GTCTCAGAAG GTCATCCAGA TAAAATCGCC 
GATCAGATTT CTGATGCGGT ATTAGACGCA ATACTTGAGC AAGATCCAAA AGCTCGTGTT 
GCGTGCGAAA CGTATGTCAA AACCGGTATG GTATTAGTGG GCGGTGAAGT CACCACTTCT 
GCTTGGGTCG ACATAGAAGA AATTACCCGT AAAACGGTAC GCGAAATCGG TTATACCAAT 
TCAGATATGG GTTTTGATGC TGATTCATGT GCGGTACTTA ATGCCATAGG CAAACAGTCA 
CCAGACATCA ATCAAGGTGT TGATCGTTCA GATCCTGCAG AGCAAGGTGC TGGTGATCAA 
GGGCTAATGT TTGGTTATGC CAGCAATGAA ACCGACGTAT TAATGCCTGC ACCGATTACT 
TACGCCCACA AATTAGTTAA GCGTCAGTCT GAAGTCCGTA AAGACGGCAC ACTACCTTGG 
TTACGCCCAG ATGCTAAAAG CCAGGTCACG TTTGCTTATG ATGATGGCAA AATCATCGGT 
ATCGATGCGA TTGTATTATC AACTCAACAT CGTGAAGATG TGACACAAGC TGATCTGATT 
GAAGCGGTAA TGGAAACCAT CATCAAGCCG GTATTACCAG CACAATGGTT AAACAAAGAC 
ACTAAATACT TTATCAACCC TACTGGTCGC TTTGTGATTG GTGGCCCAGT TGGTGACTGT 
GGTTTAACAG GTCGTAAGAT TATTGTAGAT ACTTACGGCG GTATGGCTCG TCACGGTGGT 
GGTGCTTTCT CTGGTAAAGA CCCATCTAAA GTAGACCGTA GCGCGGCTTA TGCTGCACGT 
TATGTCGCTA AGAATATTGT TGCAGCTGGT CTTGCTGACC GTTGTGAACT ACAAGTGTCT 
TATGCTATTG GTGTTGCAGA GCCAACGTCT ATTAGTATTG AAACATTCGG TACCGGTAAA 
GTATCGGAAG AAGTATTGAT TAAATTAGTA CGTCAACACT TCGAATTACG TCCATACGGC 
TTAACGGCAA TGTTAGATTT GGCGCGTCCA ATCTATCAGC AAACTGCTGC TTATGGTCAC 
TTTGGCCGTG ATATCTTCCC TTGGGAAGCG ACTGATAAAG CTGAAGCACT TCGTGCGGAT 
GCAGGTTTAT AA
 
Protein sequence
MAKHLFTSES VSEGHPDKIA DQISDAVLDA ILEQDPKARV ACETYVKTGM VLVGGEVTTS 
AWVDIEEITR KTVREIGYTN SDMGFDADSC AVLNAIGKQS PDINQGVDRS DPAEQGAGDQ 
GLMFGYASNE TDVLMPAPIT YAHKLVKRQS EVRKDGTLPW LRPDAKSQVT FAYDDGKIIG 
IDAIVLSTQH REDVTQADLI EAVMETIIKP VLPAQWLNKD TKYFINPTGR FVIGGPVGDC 
GLTGRKIIVD TYGGMARHGG GAFSGKDPSK VDRSAAYAAR YVAKNIVAAG LADRCELQVS 
YAIGVAEPTS ISIETFGTGK VSEEVLIKLV RQHFELRPYG LTAMLDLARP IYQQTAAYGH 
FGRDIFPWEA TDKAEALRAD AGL