| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0624 |
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| Symbol | |
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| ID | 4278424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 727706 |
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| End bp | 728956 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133381 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_749322 |
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| Protein GI | 114561809 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0505999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAT TAACTCAATT AGGCCTGACG GTAACTGAAC TACGTTTTGC ATTAGATACG
TTCTATTTCC TCATTTCAGG TGCGTTAGTC ATGTGGATGG CAGCTGGTTT TGCCATGTTA
GAAGCTGGCT TAGTTCGCTC AAAAAACACC ACTGAAATTT TAACCAAAAA CGTGTGTTTA
TACTCAATTG CATGTGTCAT GTTTTTGCTT GTCGGTTACA ACATTATGTA TGTCGATAAT
GTTGAAGGTG GTTTCATCCC TTCTTTTGGT TCGTTAATCG GTTCGCAAGC TGATGGTGCA
GACCATGCTT TGGAATCAGA CTTTTTCTTC CAAGTCGTGT TTGTTGCTAC GGCAATGTCG
ATAGTATCTG GTGCTGTGGC TGAGCGAATG AAGTTATGGT CTTTCTTAGC TTTTTCAGTA
GTAATGACCG CTGTCATTTA TCCTATTGAA GGCTACTGGA CTTGGGGCGG CGGATTCCTC
TCTGAAGCTG GTTTTGTTGA CTTTGCTGGT AGTGGCATTG TACACATGGC TGGTGCTGCT
GCTGCAATAT CTGGTGTGCT GCTTCTTGGT GCTCGTAAAG GTAAATATGG TGAAAATGGC
CAAGTTCATC CTATTCCTGG CTCTAACTTA CCAATGGCTA CCTTAGGTAT GTTCATTTTA
TGGATGGGTT GGTTTGGCTT CAACGGTGGT TCACAACTGT TGGTTTCTGA TGCTGAAAAC
GCCAGTGCTG TCGCTAAAAT CTTTGTAAAC ACTAACTCTG CCGCCGCATT TGGGGCAATC
TCAGCGCTTA TTGTGTGTAA AGTTGTTTGG GGTAAAGCAG ATTTAACCAT GATTTTAAAC
GGTGCGTTAG CGGGGTTAGT CGCCATTACT GCTGATCCAT TATCGCCATC AATATTAATG
GCCGGTGTGA TTGGTTTGGT TGCTGGTGCA GTTGTTATTT TTTCTGTGAT TGCATTTGAC
CGAATTAAAA TTGATGACCC AGTAGGTGCC ATTTCAGTGC ACGGTGTTGC AGGGTTCCTT
GGACTAATGT TAGTGCCATT ATCAAATGCT GATGCTAGTT TTGGTAGTCA GTTATACGGT
GCAGCAGTAA TCTTCATTTG GGTATTTACC ACATCGTTAT TGGTATGGTT TGTATTAAAA
ATGACTATGG GTATCCGTGT GACCGAAGAA GAAGAGTACA ACGGTATGGA TGCTTCTGAC
TGTGGAGTAG ATGCTTACCC TGAGTTTGTG AGTGTTAAAA CCGCGGGTTA A
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| Protein sequence | MEELTQLGLT VTELRFALDT FYFLISGALV MWMAAGFAML EAGLVRSKNT TEILTKNVCL
YSIACVMFLL VGYNIMYVDN VEGGFIPSFG SLIGSQADGA DHALESDFFF QVVFVATAMS
IVSGAVAERM KLWSFLAFSV VMTAVIYPIE GYWTWGGGFL SEAGFVDFAG SGIVHMAGAA
AAISGVLLLG ARKGKYGENG QVHPIPGSNL PMATLGMFIL WMGWFGFNGG SQLLVSDAEN
ASAVAKIFVN TNSAAAFGAI SALIVCKVVW GKADLTMILN GALAGLVAIT ADPLSPSILM
AGVIGLVAGA VVIFSVIAFD RIKIDDPVGA ISVHGVAGFL GLMLVPLSNA DASFGSQLYG
AAVIFIWVFT TSLLVWFVLK MTMGIRVTEE EEYNGMDASD CGVDAYPEFV SVKTAG
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