Gene Sfri_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0596 
Symbol 
ID4278764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp694584 
End bp695222 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content43% 
IMG OID638133353 
Producthypothetical protein 
Protein accessionYP_749294 
Protein GI114561781 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAG TAAAAGTAAT CAGTATTTTG TGGTTCATCG GTGTATTAGC TGAAGCGATG 
ACAGGCGCCC TGGCCGCAGG CAAAAAACAG ATGGACCTTT TTGGTGTGGT GATTATTGGT 
TGTGTGACCG CGATTGGTGG TGGCACTCTG CGTGACATGC TTTTGGGTAA CTATCCCCTA 
ATATGGGTTG AAAATGCACA TTATTTGTTA GCTGTTGCGG CGGCATCACT CCTAACAGTG 
ATGATTGCAC CGTTAATGCG TTACTTATCA CGATTATTTC TGGCTATTGA CGCTCTTGGT 
CTGGCGGTAT TTTCTGTTGT TGGAGCGCAG AAAACCTTAA TGCTGGGTTA TAGCATTGAG 
ATAGCCATTG CCATGGGGGT CGTGACTGGT GTTTTTGGCG GCGTTATTCG TGATGTTTTA 
TGCAATCAAG TGCCACTGAT TTTTAAGAAA GAGCTATATG CGTTAGTTGC TTTGCTAACG 
TCAGCTTTAT ATGTGGTGAT GAAGCTAAAT GGTGTTGTTG AATGGATAAA CCTTTCTGTT 
GCGCTGACCT TTGGTTTTAG CTTTAGAATG CTCGCAATTC GCTACCATTG GTCAATGCCC 
AAGTTTGACT ACCAATGTCA GTCAGACAAT ATCCATTAA
 
Protein sequence
MLEVKVISIL WFIGVLAEAM TGALAAGKKQ MDLFGVVIIG CVTAIGGGTL RDMLLGNYPL 
IWVENAHYLL AVAAASLLTV MIAPLMRYLS RLFLAIDALG LAVFSVVGAQ KTLMLGYSIE 
IAIAMGVVTG VFGGVIRDVL CNQVPLIFKK ELYALVALLT SALYVVMKLN GVVEWINLSV 
ALTFGFSFRM LAIRYHWSMP KFDYQCQSDN IH