| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0563 |
|---|
| Symbol | |
|---|
| ID | 4278504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 651700 |
|---|
| End bp | 653160 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638133321 |
|---|
| Product | catalase |
|---|
| Protein accession | YP_749262 |
|---|
| Protein GI | 114561749 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA CTAACTATTT AACTAGCCAA AATGGCGCAC CAGTAGCAGA CGACCAAAAC
TCAATGTCAG CTGGTGAGCG TGGACCACTG CTTTTACAAG ATTGGCATTT AATTGAGAAG
CTTGCTCATT TTAACCGTGA ACGTATTCCA GAGCGTGTTG TGCATGCTAA AGGAACCGGT
GTATACGGTA CATTTACACT AACTAAAGAT TTAAGTGAAT TTACCATAGC GGATCATTTT
AATGGTGTAG GCAAGCAGAC TGAAACATTC ATGCGATTCT CTACGGTAGG CGGAGAGATG
GGCTCAGCTG ATGCAGAGCG TGATCCACGC GGTTTTGGGC TACGTTTTTA TACTGCTCGT
GGTAATCATG ATATTGTCGG TAATAACACG CCAACATTCT TTATCCGTGA TGGTATTAAG
TTTCCTGACT TTATTCATAC CCAAAAACGT CACCCACAAA CTAATTTGAA AGATCCCCAA
GCAATGTGGG ACTTCTGGGC ACTCAATCCA GAGTCGATGC ATCAAGTGAC TATTTTGATG
TCAGACCGTG GTATTCCGGC TAACTACAGA CAAATGCACG GTTACGGTTC GCATACGTTT
TCGTTCTGGA ATGCTCAGGG GGAACGTTTT TGGGTTAAGT TTCACTTTAA ATCACAGCAA
GGCGTGGTGA ATTTAACCGG CGAACAAGCA GATATATTAA AAGGGATAGA TCCTGATTCA
TCACAACGCG ACATGGTGGC AGCAATTAAT GATGCTAACT TTCCGCGCTG GACTGTAAAT
GTACAGATTA TGCCAGAAGC TGATGCCAAT ACTTACGCCA TTAATCCTTT TGATTTGACT
AAAGTATGGC CGCACAGTGA TTATCCGTTG ATTGAAGTGG GTGAACTTGA GCTAAACCGC
TTACCACAAA ACTACTTTGC TGAAGTTGAA CAAGTGGCAT TAGCACCAAG TAACTTAGTG
CCCGGTGTGG GTGCATCGCC AGACAAAATG CTGCAAGCAC GTTTGTTTTC ATATGCAGAT
GCTCAGCGTT ACCGTATTGG TACTAACTAC AATCAGTTAC CGGTTAACTG TCCGCATGCC
GCTAAAGCCA ACCATCATCA ACGTGCTGGT GCTATGGCAG GAGCTCAGTG TTCTTATCAA
GGTAGCCAAA CCGGTGGTGA TGCCAGTGTT AATTATGGTC CTAACAGCGT TGCACCACTC
ACTGAAAATG CAAGTTTTGC AGAACCACCG TTACGTTTAG CAGGAGAGGT TGCACGTTTT
AGTCGTTATA ACCAAGATGA CTTTACCCAA GCTGGTAACC TATATCGTAT CTTTAGTGAA
GCAGAGAAAA ATCGTTTAGT GGAAACGATT GCGGGCACAC TCAGTCAAAC GACCTTAGAT
GTGCAACAAA AAATGGTGGA TCATTTTACT AAAGCGGATG TTGATTACGG TCGACGTGTT
AAGCAGGCTT TGGCAAAGTA A
|
|---|
| Protein sequence | MNQTNYLTSQ NGAPVADDQN SMSAGERGPL LLQDWHLIEK LAHFNRERIP ERVVHAKGTG
VYGTFTLTKD LSEFTIADHF NGVGKQTETF MRFSTVGGEM GSADAERDPR GFGLRFYTAR
GNHDIVGNNT PTFFIRDGIK FPDFIHTQKR HPQTNLKDPQ AMWDFWALNP ESMHQVTILM
SDRGIPANYR QMHGYGSHTF SFWNAQGERF WVKFHFKSQQ GVVNLTGEQA DILKGIDPDS
SQRDMVAAIN DANFPRWTVN VQIMPEADAN TYAINPFDLT KVWPHSDYPL IEVGELELNR
LPQNYFAEVE QVALAPSNLV PGVGASPDKM LQARLFSYAD AQRYRIGTNY NQLPVNCPHA
AKANHHQRAG AMAGAQCSYQ GSQTGGDASV NYGPNSVAPL TENASFAEPP LRLAGEVARF
SRYNQDDFTQ AGNLYRIFSE AEKNRLVETI AGTLSQTTLD VQQKMVDHFT KADVDYGRRV
KQALAK
|
|---|
| |