| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0557 |
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| Symbol | |
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| ID | 4278725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 646068 |
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| End bp | 647030 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133315 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_749256 |
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| Protein GI | 114561743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTT CAGTAAACCA GCCAGATTGG GATTTTATCG CCACGTCTCC TGAATTAATG
TTATCAAGTT TGACGCATAT GGGGTTAATC GAAATCACCG GTGAGCAAGG GCGCAGTTTC
ATTCATGGCC AAGTCACCAC AGATATTACC TCCCTTGGCA CAAACGAGTG GAAATGGGGT
GCTCATTGCG ACCCTAAAGG TAAAATGCTC GCCAGTTTCC GTACGTTTTC AATCGGCGAT
AGCTTATTTA TGTTACTGCC GAAAAGTACT TTAAGCTTAG ATTTACCCCA GTTACAAAAA
TACGCTGTAT TCAGTAAAGC CGAACTCGCA GATGTCAGTA ATAATTATCA AATAATTGGT
ATTGCCGGAT CACAAGCACA AGCCTTTGCA ACTGAAAACT TTGGCGATGT ATCGCAAGCA
ATTAATCTTG TAGAGCAAGG TGTAATTATT CGTGATGGCG AACGTTTTAT TGCCATTATT
AATAATGCGG CAGCAGAAAC CATCATCAGC CAATCGGGAC AAACATTGAT TGATGCCAGT
GCATGGCAAG CATTAGAAAT TAAAGCCGGC TATCCAAACA TAGATGCAGC TCATTCCGGC
CAGTACGTAG CGCAAATGTG CAACCTGCAA GCCATTAATG GTATTAGCTT TACCAAAGGC
TGTTACATGG GCCAAGAAAC CATTGCCAGA ATGAAATATC GCGGAGGCAA TAAACGTGCA
TTGTATATTA TATCTGGCAC CACCAAGCAA ACCATCAGCA CTGATACTCA ATTAGAAATT
GCCCTTGAAG ACGGTTTCCG TCGTGGTGGC AATATCATTG AATGCGTCCA ATATGGCGAT
AAAGTATTAC TGACAGCTGT ATTGCCAAAT GATACCGAAA ACACGGCGCA ACTTCGTATT
GCCGGTGATG AAAGCTCACA ATTATCTATT ATCGAGTTAC CGTATTCTTT AGCAGATGCT
TAA
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| Protein sequence | MTISVNQPDW DFIATSPELM LSSLTHMGLI EITGEQGRSF IHGQVTTDIT SLGTNEWKWG
AHCDPKGKML ASFRTFSIGD SLFMLLPKST LSLDLPQLQK YAVFSKAELA DVSNNYQIIG
IAGSQAQAFA TENFGDVSQA INLVEQGVII RDGERFIAII NNAAAETIIS QSGQTLIDAS
AWQALEIKAG YPNIDAAHSG QYVAQMCNLQ AINGISFTKG CYMGQETIAR MKYRGGNKRA
LYIISGTTKQ TISTDTQLEI ALEDGFRRGG NIIECVQYGD KVLLTAVLPN DTENTAQLRI
AGDESSQLSI IELPYSLADA
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