| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0551 |
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| Symbol | |
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| ID | 4278719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 636730 |
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| End bp | 637614 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133309 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749250 |
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| Protein GI | 114561737 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.215454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCC CAATCAAGAC CTTACAGATC TTTCTCACCA TAGTGGAAAC CAAAAACTTT
ACCCGTGCGG CACAAAAATG TTTTATGACC CAACCGACAT TGACAAAAAC CATTCAACGT
TTAGAAGACA ATATGGGTGA GCAATTGTTA ATAAGGAATA ATCAAACAGT AGAATTAACC
CAAGCAGGAC AATTGTTTGA GCAAAGCGCA CGGGAGATTT TAGGTCATTG GCACCGACTA
CAAGAAGGTA TTAACAATCT CAGTGGCTTA AAATCAGGAC GATTACGACT TGGAGTTTGC
CCTATGATGA GTAGTTTAAT CACTCCTTTG CTGACCGATT ATCGACAAAA ATATCCCGGA
ATCGAATTAC AGATGTACGA GTATGGCGGA TTTGGTTGTG AGCAAGCACT ATTGAGCAAC
AGTCTAGATA TTGCCTTTAC TGCACTTCCG ACAACGCATA AAACAGAGTT AGCAAGCCAA
CCTCTGACTA AATACCCTTT ACTGGCTTGC TTACCAGAAG GCCATCCACT TGCTGACAAT
GCTGACATAC GCTGGCAAGA CTTTGAATCT TATCCTTTCA TTCTTTACAA CGAAGACTTT
TCATTAGCAA AGTTAATTAA TTATTTAAGT CGTAAAGTTG GCGTACATCT CAACATCGCC
TTTCGAACAG GTCAGTGGGA CTTTTTAGCC GCAATGGTTG AAGCTAACTT GGGTGTCGCG
ATTTTGCCCG AACCCATTTG CCAACGGTTA ACCAATAGCA AACTGGTATT TAAACCGATG
CAACCGGCAA TGACCTGGGA TCTGGCATTA ATATGGCGAG AGAATCTACC GTTAACCCCA
CCAGCCCAAG CACTATTAAC GCTCAGCAGA AACAGTCATG AGTAA
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| Protein sequence | MNIPIKTLQI FLTIVETKNF TRAAQKCFMT QPTLTKTIQR LEDNMGEQLL IRNNQTVELT
QAGQLFEQSA REILGHWHRL QEGINNLSGL KSGRLRLGVC PMMSSLITPL LTDYRQKYPG
IELQMYEYGG FGCEQALLSN SLDIAFTALP TTHKTELASQ PLTKYPLLAC LPEGHPLADN
ADIRWQDFES YPFILYNEDF SLAKLINYLS RKVGVHLNIA FRTGQWDFLA AMVEANLGVA
ILPEPICQRL TNSKLVFKPM QPAMTWDLAL IWRENLPLTP PAQALLTLSR NSHE
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