| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0533 |
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| Symbol | |
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| ID | 4276953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 610595 |
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| End bp | 611311 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133291 |
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| Product | two-component response regulator |
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| Protein accession | YP_749232 |
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| Protein GI | 114561719 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC CGCACATTTT AATTGTTGAA GATGAAGCTG TAACTCGTAA TACATTACGC
AGTATTTTTG AAGCTGAAGG TTATGTTGTC ACTGAAGCTA ACGACGGCGC AGAAATGCAT
AAAGCCATGC AAGACAATAA GATTAACCTT GTTGTTATGG ATATTAATTT ACCAGGCAAA
AACGGCTTAT TATTAGCTCG TGAGCTACGT GAAATTAATA ACATCGGTCT TATTTTCTTG
ACTGGCCGTG ATAACGAAGT TGATAAGATT CTAGGTCTTG AAATTGGTGC TGATGATTAC
ATCACTAAAC CGTTCAACCC TCGCGAATTA ACGATTCGTG CTCGCAACCT ATTAACTCGC
GTTAATAATG CTGCAGCAGA AACTGAAGAA AAAGGTTCTG TTGAGTATTA CCGTTTTAAC
GGTTGGAGCT TAGAAATCAA TAGCCGTTCT TTGGTAAACC CACAGGGCGA AGCTTATAAG
CTTCCACGCA GCGAGTTCCG TGCGATGCTT CACTTTGTTG AAAACCCAGG TAAAATTTTA
ACACGAGCTG ACTTGTTGTT AAAAATGACT GGCCGTGAAT TAAAGCCCCA TGACCGCACT
GTTGATGTGA CAATTCGTCG TATCCGTAAG CACTTTGAAA GCTTGCCTGA TACGCCAGAA
ATCATCGCGA CAATTCACGG TGAAGGCTAT CGTTTTTGTG GTGACTTAGA AGCATAA
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| Protein sequence | MQNPHILIVE DEAVTRNTLR SIFEAEGYVV TEANDGAEMH KAMQDNKINL VVMDINLPGK
NGLLLARELR EINNIGLIFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLTR
VNNAAAETEE KGSVEYYRFN GWSLEINSRS LVNPQGEAYK LPRSEFRAML HFVENPGKIL
TRADLLLKMT GRELKPHDRT VDVTIRRIRK HFESLPDTPE IIATIHGEGY RFCGDLEA
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