| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0518 |
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| Symbol | |
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| ID | 4278651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 588987 |
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| End bp | 589976 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133276 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_749217 |
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| Protein GI | 114561704 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATTG GATTTTTTAG CGCAAAGCCT TACGACATCC GCCATTTCAA TAGTATTAAC
GAAACCTTTA AGGTTGATAT TGAATTCTTT GATTACCGAC TTTGCATGCA AAACGTAAAA
TTAGCAGAAG GCTATGAAGT TGTGTGTGCG TTCGTCAACG ACTCTTTATG TGAAGAAGTG
TTAGTTGAGT TGGCAAAAGG CGGTACAAAA ATTATTGCCA TGCGTTGTGC CGGTTTCAAT
AATGTTGATT TAATCGCTGC CGAGCGACTC GGTATGAAAG TCGTTAATGT ACCAGCATAT
TCACCTGAGT CAGTTGCCGA GCATTCGGTG GCCTTAATGT TGACCTTAAA TCGTAAAATT
CATAAAGCTT ACCAACGTAC CCGTGACGCC AATTTTGCTT TATCGGGTCT TGTCGGTTTT
AACATGTTTG GCAAAACCGT TGGGGTGATT GGTACTGGTA AAATTGGTTT GGCGACCATT
AAAATTTTGC TCGGCTTTGG CTGTAAAGTG ATCGCCCACG ATCCTTATCC AAACCAAGCG
GTAATTGACC TAGGTGTTGA ATATGTCGAT TTAAATACCT TATACCCACA ATGCGATATC
ATTAGTTTGC ATTGCCCGTT GACCAAAGAT AATCATCATT TACTCAACAA GGTCAGTTTT
AGCCAAATGA AGCAAGGCGT GATGGTGATA AATACCAGCC GCGGCGGATT ACTTGATGCA
TTTGATGCCA TGGAAGCGTT AAAAGATGGC CAAATTGGCT CGTTAGGGCT AGATGTATAC
GAAAATGAAA AAGGATTATT TTTCGAAGAT AAATCAAATG AGATTATTCA AGATGATATC
TTCCGTCGCT TGTCTGCTTG TCATAATGTG ATTTTTACTG GTCACCAAGC CTTTTTAACT
GAAGAAGCAT TAAATGCGAT AGCCTCAACA ACATTAACTA ATGTGACGCA GTTGACCACT
GGGCAAACTT GTAATAATGA GCTGTTTTAA
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| Protein sequence | MRIGFFSAKP YDIRHFNSIN ETFKVDIEFF DYRLCMQNVK LAEGYEVVCA FVNDSLCEEV
LVELAKGGTK IIAMRCAGFN NVDLIAAERL GMKVVNVPAY SPESVAEHSV ALMLTLNRKI
HKAYQRTRDA NFALSGLVGF NMFGKTVGVI GTGKIGLATI KILLGFGCKV IAHDPYPNQA
VIDLGVEYVD LNTLYPQCDI ISLHCPLTKD NHHLLNKVSF SQMKQGVMVI NTSRGGLLDA
FDAMEALKDG QIGSLGLDVY ENEKGLFFED KSNEIIQDDI FRRLSACHNV IFTGHQAFLT
EEALNAIAST TLTNVTQLTT GQTCNNELF
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