Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0511 |
Symbol | |
ID | 4278644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 579146 |
End bp | 580678 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133269 |
Product | flavocytochrome c |
Protein accession | YP_749210 |
Protein GI | 114561697 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACAG ACACTAAAAC AAATCTATCA AGACGCCACT TTTTAAAAGC AACCAGTATT ACTACCGCAA CAGCTGGATT AGCTTTATCC GGCTTTGCTT CTGCCAAAAC AGAGTCAAGC TGCACGTCAT TACCAGATAA ATGGGATGAG ACCTATGATG TCGTTGTTGT CGGTAGTGGA TTTGCAGGTT TATCTGCCGC CATCGAAGCT AAAAATGCTA AATCATCAGT TGTGGTACTT GAAAAAATGC CTGTTCCTGG TGGCAACTCA ACCATCAATG GTGGCGGTAT GGCCGTCGTC GGCAGTGATA TTCAAAAAGC CAATGGTGTA ACAGACTCTG TTGATGCAAT GCTTGCTGAT ATGTATAAAG CGGGTCTTGG TCTTAACTAC CCTAAACAAG CACGTATGGT TGCCGAACAA TCTAACGATG CATTTGAATG GTGCCGAGAT TATCTTGGTG TGAAATTCAA AGAAAAACTC GCACAATTCG GCGGGCACTC AATCCCAAGA ACACATACCA CTTATAACCA ATCTGGTTCA GGTATCGTGC ACCCAATGTT AGAAAAAGCA AAAGAACTAG GTATCCCACT CAAAAAGAAA GTCTTCGTAA AACGCCTAAT AAGCAATAAA GAAGGCAGAA TTGTAGGACT TGAGGTGATC ACTAAATTCA AGCCTGGTAA AGAAAACTCT ACTGCAACAC ATTTCATCAA AGCCAATAAA GGCGTTGTAA TGGCATCTGG TGGCTTTGCT ACCGACGTGG TTTATCGCTC ATCCCAAGAT CCTAGATTAA CAGAAGAGCT TGCAACAACA AATCACATGG GAGCCACTTC TGAATGTTTA AAAGAAATGA TCCGTGTTGG CGCAAATCCA GTGCAACTTT CTTGGATCCA ATTAGGGCCA TGGGCTTCAC CAGATGAAAA AGGCTTTGGT CTTGCTCCTA TTTTCGCTGC TTACTCAGCC TTTACTCACG GGGTGATGGT TAATCCTGAA ACCAGTGAAC GTTTTGTTGA CGAACTTGCT GACCGTAAAG TGCGTGCCGA TGCCATTATC AAAACCGGTA ATGTCGCCGT CGCGATTTGT GATGCAAAAG GAGTCAAAGC TTCTATGCAT GTTATGCCTA AGCTACTTGA TCGAAAAGTA GTACATACCT TTGACACCAT TCAAGCCCTA GCTGCTCACT ATAATATGTC GGCTAAAACG CTAGAGGCAC AAATACAACG TTATAACAGC TATGTTTTAG CAAAAAATGA CCCTGAGTTT AATAAACCGT TCTCAATGAA TCAGCAACCA ATTGTCGAAG CACCTTTCTA TGCTGTTCGT TTATGGCCTA AAGCACATCA CACAATGGGC GGTGTTGAAA TCGATACAGA AGCAAGAGTC ATCAACATTG CCACACGAGA AACCATTCCA GGATTGTTTG CATGTGGTGA ATCTACTGGG GGTACGCATG GTGCTTGTCG CCTAGGTACT GTAGCCATTC CCGACTGCAT CGTGTTTGGT CGTATTGCCG GTAAAAATGT AGCAAAAGCA TAA
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Protein sequence | MSTDTKTNLS RRHFLKATSI TTATAGLALS GFASAKTESS CTSLPDKWDE TYDVVVVGSG FAGLSAAIEA KNAKSSVVVL EKMPVPGGNS TINGGGMAVV GSDIQKANGV TDSVDAMLAD MYKAGLGLNY PKQARMVAEQ SNDAFEWCRD YLGVKFKEKL AQFGGHSIPR THTTYNQSGS GIVHPMLEKA KELGIPLKKK VFVKRLISNK EGRIVGLEVI TKFKPGKENS TATHFIKANK GVVMASGGFA TDVVYRSSQD PRLTEELATT NHMGATSECL KEMIRVGANP VQLSWIQLGP WASPDEKGFG LAPIFAAYSA FTHGVMVNPE TSERFVDELA DRKVRADAII KTGNVAVAIC DAKGVKASMH VMPKLLDRKV VHTFDTIQAL AAHYNMSAKT LEAQIQRYNS YVLAKNDPEF NKPFSMNQQP IVEAPFYAVR LWPKAHHTMG GVEIDTEARV INIATRETIP GLFACGESTG GTHGACRLGT VAIPDCIVFG RIAGKNVAKA
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