Gene Sfri_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0511 
Symbol 
ID4278644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp579146 
End bp580678 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content43% 
IMG OID638133269 
Productflavocytochrome c 
Protein accessionYP_749210 
Protein GI114561697 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01813] flavocytochrome c 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAG ACACTAAAAC AAATCTATCA AGACGCCACT TTTTAAAAGC AACCAGTATT 
ACTACCGCAA CAGCTGGATT AGCTTTATCC GGCTTTGCTT CTGCCAAAAC AGAGTCAAGC
TGCACGTCAT TACCAGATAA ATGGGATGAG ACCTATGATG TCGTTGTTGT CGGTAGTGGA
TTTGCAGGTT TATCTGCCGC CATCGAAGCT AAAAATGCTA AATCATCAGT TGTGGTACTT
GAAAAAATGC CTGTTCCTGG TGGCAACTCA ACCATCAATG GTGGCGGTAT GGCCGTCGTC
GGCAGTGATA TTCAAAAAGC CAATGGTGTA ACAGACTCTG TTGATGCAAT GCTTGCTGAT
ATGTATAAAG CGGGTCTTGG TCTTAACTAC CCTAAACAAG CACGTATGGT TGCCGAACAA
TCTAACGATG CATTTGAATG GTGCCGAGAT TATCTTGGTG TGAAATTCAA AGAAAAACTC
GCACAATTCG GCGGGCACTC AATCCCAAGA ACACATACCA CTTATAACCA ATCTGGTTCA
GGTATCGTGC ACCCAATGTT AGAAAAAGCA AAAGAACTAG GTATCCCACT CAAAAAGAAA
GTCTTCGTAA AACGCCTAAT AAGCAATAAA GAAGGCAGAA TTGTAGGACT TGAGGTGATC
ACTAAATTCA AGCCTGGTAA AGAAAACTCT ACTGCAACAC ATTTCATCAA AGCCAATAAA
GGCGTTGTAA TGGCATCTGG TGGCTTTGCT ACCGACGTGG TTTATCGCTC ATCCCAAGAT
CCTAGATTAA CAGAAGAGCT TGCAACAACA AATCACATGG GAGCCACTTC TGAATGTTTA
AAAGAAATGA TCCGTGTTGG CGCAAATCCA GTGCAACTTT CTTGGATCCA ATTAGGGCCA
TGGGCTTCAC CAGATGAAAA AGGCTTTGGT CTTGCTCCTA TTTTCGCTGC TTACTCAGCC
TTTACTCACG GGGTGATGGT TAATCCTGAA ACCAGTGAAC GTTTTGTTGA CGAACTTGCT
GACCGTAAAG TGCGTGCCGA TGCCATTATC AAAACCGGTA ATGTCGCCGT CGCGATTTGT
GATGCAAAAG GAGTCAAAGC TTCTATGCAT GTTATGCCTA AGCTACTTGA TCGAAAAGTA
GTACATACCT TTGACACCAT TCAAGCCCTA GCTGCTCACT ATAATATGTC GGCTAAAACG
CTAGAGGCAC AAATACAACG TTATAACAGC TATGTTTTAG CAAAAAATGA CCCTGAGTTT
AATAAACCGT TCTCAATGAA TCAGCAACCA ATTGTCGAAG CACCTTTCTA TGCTGTTCGT
TTATGGCCTA AAGCACATCA CACAATGGGC GGTGTTGAAA TCGATACAGA AGCAAGAGTC
ATCAACATTG CCACACGAGA AACCATTCCA GGATTGTTTG CATGTGGTGA ATCTACTGGG
GGTACGCATG GTGCTTGTCG CCTAGGTACT GTAGCCATTC CCGACTGCAT CGTGTTTGGT
CGTATTGCCG GTAAAAATGT AGCAAAAGCA TAA
 
Protein sequence
MSTDTKTNLS RRHFLKATSI TTATAGLALS GFASAKTESS CTSLPDKWDE TYDVVVVGSG 
FAGLSAAIEA KNAKSSVVVL EKMPVPGGNS TINGGGMAVV GSDIQKANGV TDSVDAMLAD
MYKAGLGLNY PKQARMVAEQ SNDAFEWCRD YLGVKFKEKL AQFGGHSIPR THTTYNQSGS
GIVHPMLEKA KELGIPLKKK VFVKRLISNK EGRIVGLEVI TKFKPGKENS TATHFIKANK
GVVMASGGFA TDVVYRSSQD PRLTEELATT NHMGATSECL KEMIRVGANP VQLSWIQLGP
WASPDEKGFG LAPIFAAYSA FTHGVMVNPE TSERFVDELA DRKVRADAII KTGNVAVAIC
DAKGVKASMH VMPKLLDRKV VHTFDTIQAL AAHYNMSAKT LEAQIQRYNS YVLAKNDPEF
NKPFSMNQQP IVEAPFYAVR LWPKAHHTMG GVEIDTEARV INIATRETIP GLFACGESTG
GTHGACRLGT VAIPDCIVFG RIAGKNVAKA