Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0461 |
Symbol | |
ID | 4277074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 528728 |
End bp | 530032 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133219 |
Product | ATP-dependent RNA helicase RhlB |
Protein accession | YP_749161 |
Protein GI | 114561648 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.388345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAA CACATTTATC GACCAAGAAA TTCGCCGACT TCCCTTTAAA GCCCGAAATA CTCGCGGCAT TGAACGAGAA CGGCTTTGAG TTTTGCACGC CAATACAGGC GTTATCTTTA CCTATTTTAC TTAATGCAAA AGATATTGCC GGACAAGCCC AAACCGGCAC CGGTAAAACT ATGGCATTTT TAGTGGCCAC ATTTAACCAC TTACTTAATG TTGCTGCACC TGAGAGTCGC AAAGCAACTG AACCCCGCGC TATTATTATG GCGCCTACAC GTGAATTAGC AATTCAGATT GCTAAAGATG CCAAGTTATT AGCGGCACAT ACAGGCTTAA AAGTTGGCAT CGTTTACGGT GGCGAAAGCT ATGAAACTCA GCGCGCTGTA TTAGACAAAG GCGTTGATAT TCTAATTGGT ACCACCGGAC GTATTATTGA TTATGTGCGT CAGGGAGTGA TTAGTTTAAG CCACATTCAA GCCGTTGTGC TTGATGAAGC TGACCGTATG TTTGATCTTG GCTTTATTAA AGACATTCGC TTTTTATTCC GCAGAATGCC TGATGCTAAG TCACGCTTGA ATATGCTGTT TTCTGCCACG CTTTCAATGA AAGTGCAGGA ATTAGCATAC GATCATATGA ATGATCCTGA AAAAGTTGAA ATCGAACCGT TAGAAAAAAC CTCTAAAAAT ATCAAAGAGG AAATTTTCTA CCCGTCGATG GAAGATAAGA TGCGTTTATT ACTGAGCTTA ATTGAAGAAG ATTGGCCAGA TAAAGCGATT GTGTTTTCGA ACACAAAACA CAGCTGTGAA AAGTTGTGGT CTTATTTAGA AGGTGACGGT CATCGTGTGG GTTTATTAAC CGGTGATGTT CCGCAAAAGA AACGTATCCG CATTCTTGAG CAATTTACCT CTGGTGAAAT CGATGTATTA GTGGCAACAG ATGTAGCCGC ACGTGGTTTA CATATTTCTG ATGTGTCACA CGTATATAAC TATGATTTAC CTGATGATTG TGAAGATTAT GTGCATCGTA TTGGCCGAAC CGGTCGTGCG GGACAGAAAG GTATTTCAAT CAGTTTTGCT TGTGAAGAAT ATGCACTGAA TTTACCTGAA ATTGAAACCT ATATTAACCA TTCTATTCCT GTGTCTAATT ACGATAAAGA TGCGCTATTA GATGATATTC CGCCTCCGGC GCGTATTCAT CGTAAGCCTC CTACATCTCG GACTCGTGAT GGTGGAAGTA AAGGTGCTCA TCGTAGTGGT GGAAATACTT CACGTCCGCC ACGCCATAGG ACTCGTAGAC CATAG
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Protein sequence | MSQTHLSTKK FADFPLKPEI LAALNENGFE FCTPIQALSL PILLNAKDIA GQAQTGTGKT MAFLVATFNH LLNVAAPESR KATEPRAIIM APTRELAIQI AKDAKLLAAH TGLKVGIVYG GESYETQRAV LDKGVDILIG TTGRIIDYVR QGVISLSHIQ AVVLDEADRM FDLGFIKDIR FLFRRMPDAK SRLNMLFSAT LSMKVQELAY DHMNDPEKVE IEPLEKTSKN IKEEIFYPSM EDKMRLLLSL IEEDWPDKAI VFSNTKHSCE KLWSYLEGDG HRVGLLTGDV PQKKRIRILE QFTSGEIDVL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GQKGISISFA CEEYALNLPE IETYINHSIP VSNYDKDALL DDIPPPARIH RKPPTSRTRD GGSKGAHRSG GNTSRPPRHR TRRP
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